Basic Information
|
CGSNL 遺伝子シンボル
|
SUB1C
|
遺伝子シンボルシノニム
|
Sub1C, OsERF#073, OsERF073, ERF073, OsERF73, ERF73, AP2/EREBP#122, AP2/EREBP122
|
CGSNL 遺伝子名
|
SUBMERGENCE 1C
|
遺伝子名シノニム
|
submergence-1C, ethylene response factor 73, APETALA2/ethylene-responsive element binding protein 122
|
タンパク質名
|
|
対立遺伝子
|
Sub1C-1, Sub1C-2
|
染色体番号
|
9
|
解説
|
AP006758. EU429445: OnSub1C-1 (Oryza nivara Sub1C-1), EU429446: OrSub1C-1 (Oryza rufipogon Sub1C-1). HM117839: OrhSub1C-1-L (O. rhizomatis SUB1C-1-Like), FR720463-FR720467: OeSub1C-1-L (alleles: OeSUB1C-1-L1, OeSUB1C-1-L2, OeSUB1C-1-L3, OeSUB1C-1-L4, OeSUB1C-1-L5) (O. eichingeri SUB1C-1-Like). a group VII ethylene response factor (ERFVII).
|
形質クラス
|
耐性、抵抗性 - ストレス耐性
|
発現
|
|
Sequence/Locus
|
cDNA Accession No.
|
AK072749
|
MSU ID
|
LOC_Os09g11460.1
LOC_Os09g11460.2
|
RAP ID
|
Os09g0286600
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List (Test version)
|
Link to INSD Accession List
|
マップ
|
位置情報(cM)
|
|
リンケージマップ
|
Classical linkage map
|
文献
|
Loreti E., Perata P.
Front Genet 2023 14 1213839
ERFVII transcription factors and their role in the adaptation to hypoxia in Arabidopsis and crops.
|
Ma B., He S.J., Duan K.X., Yin C.C., Chen H., Yang C., Xiong Q., Song Q.X., Lu X., Chen H.W., Zhang W.K., Lu T.G., Chen S.Y., Zhang J.S.
Mol Plant 2013 6(6) 1830-48
Identification of rice ethylene-response mutants and characterization of MHZ7/OsEIN2 in distinct ethylene response and yield trait regulation.
|
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
|
Niroula R.K., Pucciariello C., Ho V.T., Novi G., Fukao T., Perata P.
Plant J. 2012 72(2) 282-93
SUB1A-dependent and -independent mechanisms are involved in the flooding tolerance of wild rice species.
|
Gibbs D.J., Lee S.C., Isa N.M., Gramuglia S., Fukao T., Bassel G.W., Correia C.S., Corbineau F., Theodoulou F.L., Bailey-Serres J., Holdsworth M.J.
Nature 2011 479(7373) 415-8
Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants.
|
Fukao T,Yeung E,Bailey-Serres J
Plant Cell 2011 23(1) 412-27
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice.
|
Jung KH,Seo YS,Walia H,Cao P,Fukao T,Canlas PE,Amonpant F,Bailey-Serres J,Ronald PC
Plant Physiol. 2010 152 1674-92
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
|
Fukao,T., Harris,T. and Bailey-Serres,J.
Ann. Bot. 2009 103(2) 143-150
Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice
|
Fukao T., Julia Bailey-Serres
Proc. Natl. Acad. Sci. U.S.A. 2008 105(43) 16814-9
submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice.
|
Xu,K., Xu,X., Fukao,T., Canlas,P., Maghirang-Rodriguez,R., Heuer,S., Ismail,A.M., Bailey-Serres,J., Ronald,P.C. and Mackill,D.J.
Nature 2006 442(7103) 705-708
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
|
Fukao T, Xu K, Ronald PC, Bailey-Serres J.
Plant Cell 2006 18(8) 2021-2034
A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice.
|
Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006 140(2) 411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
|
TextPresso Search
|
Search textpresso for SUB1C
( Recent references may be retrievable, but without any warranty )
|
DB Reference
|
Gramene ID
|
-
|
オントロジー
|
Gene Ontology
|
response to hypoxia( GO:0001666 )
response to deep water( GO:0030912 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
response to flooding( GO:0009413 )
nucleus( GO:0005634 )
response to ethylene stimulus( GO:0009723 )
|
Trait Ontology
|
ethylene sensitivity( TO:0000173 )
submergence tolerance( TO:0000524 )
|
Plant Ontology
|
-
|
関連系統
|
-
|
形質画像
|
-
|
更新日
|
2023-12-01 10:04:09.915
|