Basic Information
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CGSNL 遺伝子シンボル
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SUB1B
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遺伝子シンボルシノニム
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Sub1B, OsSUB1B, OsERF#063, OsERF063, ERF063, OsERF63, ERF63, AP2/EREBP#166, AP2/EREBP166
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CGSNL 遺伝子名
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SUBMERGENCE 1B
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遺伝子名シノニム
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submergence-1B, ethylene response factor 63, APETALA2/ethylene-responsive element binding protein 166
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タンパク質名
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対立遺伝子
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Sub1B-1, Sub1B-2
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染色体番号
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9
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解説
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AP005705. EU429442: OnSub1B-1 (Oryza nivara Sub1B-1), EU429443: OnSub1B-2 (Oryza nivara Sub1B-2), EU429444: OrSub1B-1 (Oryza rufipogon Sub1B-1). a group VII ethylene response factor (ERFVII).
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形質クラス
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耐性、抵抗性 - ストレス耐性
QTLの特性 - 発芽
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発現
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Sequence/Locus
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cDNA Accession No.
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AK106057
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MSU ID
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LOC_Os09g11480.1
LOC_Os09g11480.2
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RAP ID
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Os09g0287000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List (Test version)
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-
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Loreti E., Perata P.
Front Genet 2023 14 1213839
ERFVII transcription factors and their role in the adaptation to hypoxia in Arabidopsis and crops.
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Naithani S., Mohanty B., Elser J., D'Eustachio P., Jaiswal P.
Plants (Basel) 2023 12(11)
Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (<i>Oryza sativa</i>).
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Ma B., He S.J., Duan K.X., Yin C.C., Chen H., Yang C., Xiong Q., Song Q.X., Lu X., Chen H.W., Zhang W.K., Lu T.G., Chen S.Y., Zhang J.S.
Mol Plant 2013 6(6) 1830-48
Identification of rice ethylene-response mutants and characterization of MHZ7/OsEIN2 in distinct ethylene response and yield trait regulation.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Fukao T,Yeung E,Bailey-Serres J
Plant Cell 2011 23(1) 412-27
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice.
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Jung KH,Seo YS,Walia H,Cao P,Fukao T,Canlas PE,Amonpant F,Bailey-Serres J,Ronald PC
Plant Physiol. 2010 152 1674-92
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
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Fukao,T., Harris,T. and Bailey-Serres,J.
Ann. Bot. 2009 103(2) 143-150
Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice
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Fukao T., Julia Bailey-Serres
Proc. Natl. Acad. Sci. U.S.A. 2008 105(43) 16814-9
submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice.
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Xu,K., Xu,X., Fukao,T., Canlas,P., Maghirang-Rodriguez,R., Heuer,S., Ismail,A.M., Bailey-Serres,J., Ronald,P.C. and Mackill,D.J.
Nature 2006 442(7103) 705-708
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
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Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006 140(2) 411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
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Fukao T, Xu K, Ronald PC, Bailey-Serres J.
Plant Cell 2006 18(8) 2021-2034
A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice.
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TextPresso Search
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Search textpresso for SUB1B
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to hypoxia( GO:0001666 )
response to deep water( GO:0030912 )
response to gravity( GO:0009629 )
seed germination( GO:0009845 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
response to flooding( GO:0009413 )
response to ethylene stimulus( GO:0009723 )
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Trait Ontology
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ethylene sensitivity( TO:0000173 )
submergence tolerance( TO:0000524 )
gravity response trait( TO:0002693 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
coleoptile emergence stage( PO:0007045 )
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関連系統
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-
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形質画像
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-
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更新日
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2023-12-01 10:04:40.107
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