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Basic Information
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CGSNL 遺伝子シンボル
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COLD11
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遺伝子シンボルシノニム
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OsRAD51A1, RAD51A1, OsCOLD11
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CGSNL 遺伝子名
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CHILLING TOLERANCE DIVERGENCE 11
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遺伝子名シノニム
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DNA repair protein RAD51A1
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タンパク質名
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DNA REPAIR PROTEIN RAD51A
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対立遺伝子
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rad51a1, Osrad51a1, Osrad51a2, Osrad51-1, Osrad51-2, cold11-1, cold11-2, cold11-3, cold11-4
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染色体番号
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11
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解説
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AB08262, AB08261. the major gene underlying qCTS11-1. GO:1904975: response to bleomycin. GO:0035825: homologous recombination. PO:0030123: panicle inflorescence.
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形質クラス
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生化学的性質
生殖器官 - 受粉、受精、稔性 - 雄性不稔
生殖器官 - 受粉、受精、稔性 - 減数分裂
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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AB080262
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MSU ID
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LOC_Os11g40150.1
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RAP ID
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Os11g0615800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Li Z., Wang B., Luo W., Xu Y., Wang J., Xue Z., Niu Y., Cheng Z., Ge S., Zhang W., Zhang J., Li Q., Chong K.
Sci Adv 2023 9(1) eabq5506
Natural variation of codon repeats in <i>COLD11</i> endows rice with chilling resilience.
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Liu X., Cao Y., Du G., Zhang C., Xu M., Cheng Z., Shen Y., Yu H.
Int J Mol Sci 2022 23(17)
OsRAD51 Plays a Vital Role in Promoting Homologous Recombination in Rice Meiosis.
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Fu R., Wang C., Shen H., Zhang J., Higgins J.D., Liang W.
Front Plant Sci 2020 11 600820
Rice OsBRCA2 Is Required for DNA Double-Strand Break Repair in Meiotic Cells.
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Shim J.S., Oh N., Chung P.J., Kim Y.S., Choi Y.D., Kim J.K.
Front Plant Sci 2018 9 310
Overexpression of <i>OsNAC14</i> Improves drought tolerance in Rice.
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Xu Z., Zhang J., Xu M., Ji W., Yu M., Tao Y., Gong Z., Gu M., Yu H.
Plant J. 2018 95(2) 282-295
Rice rad51 paralogs play essential roles in somatic homologous recombination for DNA repair.
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Zhang P., Zhang Y., Sun L., Sinumporn S., Yang Z., Sun B., Xuan D., Li Z., Yu P., Wu W., Wang K., Cao L., Cheng S.
Front Plant Sci 2017 8 1639
The Rice AAA-ATPase OsFIGNL1 Is Essential for Male Meiosis.
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Morozumi Y., Ino R., Ikawa S., Mimida N., Shimizu T., Toki S., Ichikawa H., Shibata T., Kurumizaka H.
PLoS ONE 2013 8(10) e75451
Homologous Pairing Activities of Two Rice RAD51 Proteins, RAD51A1 and RAD51A2.
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Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010 154(4) 1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
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Rajanikant,C., Melzer,M., Rao,B.J. and Sainis,J.K.
Plant Mol. Biol. 2008 68(4-5) 479-491
Homologous recombination properties of OsRad51, a recombinase from rice
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TextPresso Search
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Search textpresso for COLD11
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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double-strand break repair( GO:0006302 )
nucleus( GO:0005634 )
response to cold( GO:0009409 )
synapsis( GO:0007129 )
pollen development( GO:0009555 )
synaptonemal complex assembly( GO:0007130 )
reciprocal meiotic recombination( GO:0007131 )
meiotic cell cycle( GO:0051321 )
damaged DNA binding( GO:0003684 )
ATP binding( GO:0005524 )
DNA-dependent ATPase activity( GO:0008094 )
DNA repair( GO:0006281 )
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Trait Ontology
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male sterility( TO:0000437 )
cold tolerance( TO:0000303 )
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Plant Ontology
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inflorescence( PO:0009049 )
pollen development stage( PO:0001007 )
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関連系統
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-
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形質画像
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更新日
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2023-06-13 09:33:24.816
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更新情報
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