遺伝子 - 詳細

詳細 - 遺伝子

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Basic Information
CGSNL 遺伝子シンボル FLO5
遺伝子シンボルシノニム OsSSIIIa, SSIII-2, OsSSIII-2, OsSS3A, SS3A, SS3a, OsSSSIIIa, SSIIIa, Flo5
CGSNL 遺伝子名 FLOURY ENDOSPERM 5
遺伝子名シノニム SOLUBLE STARCH SYNTHASE III-2, SOLUBLE STARCH SYNTHASE IIIA, 粉質胚乳5
タンパク質名 SOLUBLE STARCH SYNTHASE IIIA
対立遺伝子 ss3a, b10, flo5-1, flo5-2
染色体番号 8
解説 AY100469. an RS (resistant starch) locus. TO:0001069: cooking quality trait.
形質クラス 生化学的性質
耐性、抵抗性 - ストレス耐性
種子 - 生理的な特色 - 貯蔵物質
QTLの特性 - 粒品質
発現
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os08g09230.1
LOC_Os08g09230.2
RAP ID Os08g0191433
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
マップ
位置情報(cM)
リンケージマップ Classical linkage map
文献
Zheng Y., Thi K.M., Lin L., Xie X., Khine E.E., Nyein E.E., Lin M.H.W., New W.W., Aye S.S., Wu W.
Front Plant Sci 2023  14  1250854
Genome-wide association study of cooking-caused grain expansion in rice (<i>Oryza sativa</i> L.).
Kamara N., Jiao Y., Huang W., Cao L., Zhu L., Zhao C., Huang X., Shivute F.N., Liu X., Wu J., Shahid M.Q.
Front Plant Sci 2023  14  1229870
Comparative cytological and transcriptome analyses of <i>ny2</i> mutant delayed degeneration of tapetal cells and promotes abnormal microspore development in neo-tetraploid rice.
Jin S.K., Xu L.N., Leng Y.J., Zhang M.Q., Yang Q.Q., Wang S.L., Jia S.W., Song T., Wang R.A., Tao T., Liu Q.Q., Cai X.L., Gao J.P.
Plant Biotechnol. J. 2023   
The OsNAC24-OsNAP protein complex activates OsGBSSI and OsSBEI expression to fine-tune starch biosynthesis in rice endosperm.
Sun C., Wang Y., Yang X., Tang L., Wan C., Liu J., Chen C., Zhang H., He C., Liu C., Wang Q., Zhang K., Zhang W., Yang B., Li S., Zhu J., Sun Y., Li W., Zhou Y., Wang P., Deng X.
Plant Biotechnol. J. 2023  21(3)  621-634
MATE transporter GFD1 cooperates with sugar transporters, mediates carbohydrate partitioning and controls grain-filling duration, grain size and number in rice.
Irshad F., Li C., Wu H.Y., Yan Y., Xu J.H.
Int J Mol Sci 2022  23(12) 
The Function of DNA Demethylase Gene ROS1a Null Mutant on Seed Development in Rice (<i>Oryza Sativa</i>) Using the CRISPR/Cas9 System.
Teng Z., Chen Y., Yuan Y., Peng Y., Yi Y., Yu H., Yi Z., Yang J., Peng Y., Duan M., Zhang J., Ye N.
The Crop Journal 2022  10  962-972
Identification of microRNAs regulating grain filling of rice inferior spikelets in response to moderate soil drying post-anthesis
Niu B., Zhang Z., Zhang J., Zhou Y., Chen C.
Plant J. 2021  106(5)  1233-1246
The rice LEC1-like transcription factor OsNF-YB9 interacts with SPK, an endosperm-specific sucrose synthase protein kinase, and functions in seed development.
Liu X., Luo J., Li T., Yang H., Wang P., Su L., Zheng Y., Bao C., Zhou C.
Rice (N Y) 2021  14(1)  25
SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other Histone Modifications.
Zhang H., Jang S.G., Lar S.M., Lee A.R., Cao F.Y., Seo J., Kwon S.W.
Plants (Basel) 2021  10(6) 
Genome-Wide Identification and Genetic Variations of the starch synthase Gene Family in Rice.
Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(42)  26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
Chen C., He B., Liu X., Ma X., Liu Y., Yao H.Y., Zhang P., Yin J., Wei X., Koh H.J., Yang C., Xue H.W., Fang Z., Qiao Y.
Plant Biotechnol. J. 2019   
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP1) regulates starch biosynthesis and seed development via heterotetramer formation in rice (Oryza sativa L.).
Xiong Y., Ren Y., Li W., Wu F., Yang W., Huang X., Yao J.
J. Exp. Bot. 2019  70(15)  3765-3780
NF-YC12 is a key multi-functional regulator of accumulation of seed storage substances in rice.
Fan C., Wang G., Wang Y., Zhang R., Wang Y., Feng S., Luo K., Peng L.
Int J Mol Sci 2019  20(20) 
sucrose synthase Enhances Hull Size and grain weight by Regulating Cell Division and Starch Accumulation in Transgenic Rice.
Chen L., Yuan Y., Wu J., Chen Z., Wang L., Shahid M.Q., Liu X.
Rice (N Y) 2019  12(1)  34
Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes.
Long W., Wang Y., Zhu S., Jing W., Wang Y., Ren Y., Tian Y., Liu S., Liu X., Chen L., Wang D., Zhong M., Zhang Y., Hu T., Zhu J., Hao Y., Zhu X., Zhang W., Wang C., Zhang W., Wan J.
Plant Physiol. 2018  177(2)  698-712
FLOURY shrunken endosperm1 Connects Phospholipid Metabolism and Amyloplast Development in Rice.
Crofts N., Sugimoto K., Oitome N.F., Nakamura Y., Fujita N.
Plant Mol. Biol. 2017  94(4-5)  399-417
Differences in specificity and compensatory functions among three major starch synthases determine the structure of amylopectin in rice endosperm.
Zhou H., Wang L., Liu G., Meng X., Jing Y., Shu X., Kong X., Sun J., Yu H., Smith S.M., Wu D., Li J.
Proc. Natl. Acad. Sci. U.S.A. 2016   
Critical roles of soluble starch synthase SSIIIa and granule-bound starch synthase Waxy in synthesizing resistant starch in rice.
Ordonio R.L., Matsuoka M.
Proc. Natl. Acad. Sci. U.S.A. 2016   
Increasing resistant starch content in rice for better consumer health.
Asai H., Abe N., Matsushima R., Crofts N., Oitome N.F., Nakamura Y., Fujita N.
J. Exp. Bot. 2014  65(18)  5497-507
Deficiencies in both Starch synthase IIIa and branching enzyme IIb lead to a significant increase in amylose in SSIIa-inactive japonica rice seeds.
Lu F.H., Park Y.J.
J. Cereal Sci. 2012  56  706-712
An SNP downstream of the OsBEIIb gene is significantly associated with amylose content and viscosity properties in rice (Oryza sativa L.)
Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011  122(1)  63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
Fujita N., Satoh R., Hayashi A., Kodama M., Itoh R., Aihara S., Nakamura Y.
J. Exp. Bot. 2011  62(14)  4819-31
Starch biosynthesis in rice endosperm requires the presence of either Starch synthase I or IIIa.
Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(51)  21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
Satoh,H., Shibahara,K., Tokunaga,T., Nishi,A., Tasaki,M., Hwang,S.K., Okita,T.W., Kaneko,N., Fujita,N., Yoshida,M., Hosaka,Y., Sato,A., Utsumi,Y., Ohdan,T. and Nakamura,Y.
Plant Cell 2008  20(7)  1833-1849
Mutation of the Plastidial {alpha}-Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm
Ryoo N, Yu C, Park CS, Baik MY, Park IM, Cho MH, Bhoo SH, An G, Hahn TR, Jeon JS.
Plant Cell Rep. 2007  26(7)  1083-95
Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.).
Fujita N,Yoshida M,Kondo T,Saito K,Utsumi Y,Tokunaga T,Nishi A,Satoh H,Park JH,Jane JL,Miyao A,Hirochika H,Nakamura Y
Plant Physiol. 2007  144  2009-23
Characterization of SSIIIa-deficient mutants of rice: the function of SSIIIa and pleiotropic effects by SSIIIa deficiency in the rice endosperm.
Fujita N, Yoshida M, Asakura N, Ohdan T, Miyao A, Hirochika H, Nakamura Y.
Plant Physiol. 2006  140(3)  1070-84
Function and characterization of starch synthase I using mutants in rice.
Dian,W., Jiang,H. and Wu,P.
J. Exp. Bot. 2005  56(412)  623-632
Evolution and expression analysis of starch synthase III and IV in rice.
Hirose T, Terao T.
Planta. 2004  220(1)  9-16
A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.).
TextPresso Search Search textpresso for FLO5 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061114
オントロジー
Gene Ontology response to desiccation( GO:0009269 )
starch biosynthetic process( GO:0019252 )
starch synthase activity( GO:0009011 )
chloroplast( GO:0009507 )
amyloplast( GO:0009501 )
polysaccharide metabolic process( GO:0005976 )
amyloplast starch grain( GO:0009568 )
Trait Ontology seed composition based quality trait( TO:0000488 )
gelatinization temperature( TO:0000462 )
cooking or brewing quality( TO:0000667 )
drought related trait( TO:0000394 )
Plant Ontology seed( PO:0009010 )
endosperm( PO:0009089 )
関連系統
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形質画像
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更新日
2024-01-18 11:14:46.705

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