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Basic Information
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CGSNL 遺伝子シンボル
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HDAC2
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遺伝子シンボルシノニム
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OsHDAC2, HDA710, OsHDA710
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CGSNL 遺伝子名
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CLASS-1 TYPE HISTONE DEACETYLASE 2
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遺伝子名シノニム
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class-1 type histone deacetylase2, histone deacetylase 710
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タンパク質名
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CLASS-1 TYPE HISTONE DEACETYLASE 2
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対立遺伝子
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染色体番号
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2
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解説
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This gene controls histone deacetylase. This gene is expressed in the root and callus cells, but not in the leaves. AF513383. Q6YV04. OsHDA710 in Hou et al. 2921. RPD/HDA1 family.
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形質クラス
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耐性、抵抗性 - ストレス耐性
生化学的性質
その他
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発現
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Sequence/Locus
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cDNA Accession No.
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AK103097
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MSU ID
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LOC_Os02g12380.1
LOC_Os02g12380.2
LOC_Os02g12380.3
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RAP ID
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Os02g0215200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Hou J., Ren R., Xiao H., Chen Z., Yu J., Zhang H., Shi Q., Hou H., He S., Li L.
Planta 2021 253(3) 72
Characteristic and evolution of HAT and HDAC genes in Gramineae genomes and their expression analysis under diverse stress in Oryza sativa.
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Xie Y., Zhang Y., Han J., Luo J., Li G., Huang J., Wu H., Tian Q., Zhu Q., Chen Y., Kawano Y., Liu Y.G., Chen L.
Mol Plant 2018 11(5) 720-735
The Intronic cis Element SE1 Recruits trans-Acting Repressor Complexes to Repress the Expression of ELONGATED UPPERMOST INTERNODE1 in Rice.
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Hu Y,Qin F,Huang L,Sun Q,Li C,Zhao Y,Zhou DX
Biochem. Biophys. Res. Commun. 2009 388 266-71
Rice histone deacetylase genes display specific expression patterns and developmental functions.
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Jang, I.C., Y.M. Park, S.I. Song, H.J. Kwon, B.H. Nahm and J.K. Kim
Plant J. 2003 33 (3) 531-541
Structure and expression of the rice class-1 type histone deacetylase genes OsHDAC1-3: OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture.
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TextPresso Search
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Search textpresso for HDAC2
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to auxin stimulus( GO:0009733 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
regulation of transcription from RNA polymerase II promoter( GO:0006357 )
histone deacetylation( GO:0016575 )
chromatin organization( GO:0006325 )
zinc ion binding( GO:0008270 )
nucleus( GO:0005634 )
histone deacetylase activity( GO:0004407 )
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Trait Ontology
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drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
auxin sensitivity( TO:0000163 )
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Plant Ontology
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plant embryo( PO:0009009 )
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関連系統
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-
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形質画像
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更新日
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2023-02-20 09:56:48.779
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更新情報
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