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Basic Information
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CGSNL 遺伝子シンボル
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COG1
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遺伝子シンボルシノニム
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OsMADS17, MADS17, NMADS3, RMADS213, nmads3
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CGSNL 遺伝子名
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CONTROL OF GRAIN YIELD 1
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遺伝子名シノニム
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MADS box gene17, MADS-box transcription factor 17
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タンパク質名
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MADS-BOX TRANSCRIPTION FACTOR 17
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対立遺伝子
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染色体番号
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4
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解説
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Q7XUN2. AF109153. AF095646. GQ496628, GQ496629, GQ496630 (wild rice species). the candidate gene for qGL4/qRLW4 (QTL for grain length and ratio of length-to-width).
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形質クラス
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生殖器官 - 穂
耐性、抵抗性 - ストレス耐性
QTLの特性 - 収穫と生産性
生殖器官 - 小穂、花、頴、芒
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発現
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Sequence/Locus
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cDNA Accession No.
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AK070540
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MSU ID
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LOC_Os04g49150.1
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RAP ID
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Os04g0580700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Li Y., Wu S., Huang Y., Ma X., Tan L., Liu F., Lv Q., Zhu Z., Hu M., Fu Y., Zhang K., Gu P., Xie D., Sun H., Sun C.
Nat Commun 2023 14(1) 3098
OsMADS17 simultaneously increases grain number and grain weight in rice.
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Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Niu Y., Chen T., Wang C., Chen K., Shen C., Chen H., Zhu S., Wu Z., Zheng T., Zhang F., Xu J.
BMC Genomics 2021 22(1) 602
Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study.
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Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018 675 285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
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Bai X., Huang Y., Mao D., Wen M., Zhang L., Xing Y.
Sci Rep 2016 6 19022
Regulatory role of FZP in the determination of panicle branching and spikelet formation in rice.
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Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014 65(18) 5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
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Duan Y., Xing Z., Diao Z., Xu W., Li S., Du X., Wu G., Wang C., Lan T., Meng Z., Liu H., Wang F., Wu W., Xue Y.
Plant Mol. Biol. 2012 80(4-5) 429-42
Characterization of OsMADS6-5, a null allele, reveals that OsMADS6 is a critical regulator for early flower development in rice (Oryza sativa L.).
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Zhang L., Cheng Z., Qin R., Qiu Y., Wang J.L., Cui X., Gu L., Zhang X., Guo X., Wang D., Jiang L., Wu C.Y., Wang H., Cao X., Wan J.
Plant Cell 2012 24(11) 4407-21
Identification and characterization of an epi-allele of FIE1 reveals a regulatory linkage between two epigenetic marks in rice.
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Ohmori S,Kimizu M,Sugita M,Miyao A,Hirochika H,Uchida E,Nagato Y,Yoshida H
Plant Cell 2009 21(10) 3008-25
MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice.
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Reinheimer R,Kellogg EA
Plant Cell 2009 21(9) 2591-605
Evolution of AGL6-like MADS box genes in grasses (Poaceae): ovule expression is ancient and palea expression is new.
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Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
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Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003 44(12) 1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
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Yuan,Z., Qian,X., Liu,J., Liu,J., Qian,M., Yang,J. and Liu,J.
Prog. Nat. Sci. 2000 10 357-363
Cloning and characterization of two cDNAs encoding rice MADS box protein
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Moon,Y.H., Kang,H.G., Jung,J.Y., Jeon,J.S., Sung,S.K. and An,G.
Plant Physiol. 1999 120(4) 1193-1204
Determination of the motif responsible for interaction between the rice APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system.
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TextPresso Search
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Search textpresso for COG1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to deep water( GO:0030912 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
protein binding( GO:0005515 )
inflorescence development( GO:0010229 )
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Trait Ontology
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inflorescence development trait( TO:0000621 )
submergence tolerance( TO:0000524 )
grain number( TO:0002759 )
grain weight( TO:0000590 )
grain yield( TO:0000396 )
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Plant Ontology
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inflorescence development stage( PO:0001083 )
primordium( PO:0025127 )
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関連系統
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形質画像
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更新日
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2023-09-06 10:52:09.363
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更新情報
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