Basic Information
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CGSNL 遺伝子シンボル
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PLDalpha1
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遺伝子シンボルシノニム
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RPLD1, PLD1, OsPLDalpha1, OsC2DP2, C2DP2
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CGSNL 遺伝子名
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PHOSPHOLIPASE D ALPHA 1
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遺伝子名シノニム
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Rice phospholipase D-1, Phospholipase D alpha 1, PLD alpha 1, Choline phosphatase 1, Phosphatidylcholine-hydrolyzing phospholipase D 1, phospholipase Dalpha1, C2 Domain-Containing Protein 2
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タンパク質名
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PHOSPHOLIPASE D ALPHA 1
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対立遺伝子
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pldalpha1-1, pldalpha1, ospldalpha1, ospldalpha1-1, ospldalpha1-2, OsPLDalpha1-1a
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染色体番号
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1
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解説
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Phospholipase Dを支配する遺伝子で、染色体1上の24.0cMの位置にマーカーRG472とRG246の間にある. AB571657. AB001920, D73411. AU091558, AU032202, BE039748, AU032715, D47979, AU032201, AU062713, AW155115, AW155255, AU182480, AU184488, BI118697, AU197861, AU197860, BI799720, BI813684, BI807829, AU184489. EC=3.1.4.4 Q43007. MF966931 (Oryza officinalis OsPLDalpha1-1a).TO:0001069: cooking quality trait. the GenBank repository with accession numbers: O. glaberrima [IRGC100854 (MF774061), IRGC101800 (MF919319), IRGC102196 (MF919320), IRGC102489 (MF919321), IRGC102512 (MF919322), IRGC102600b (MF919323), IRGC102925 (MF919324), IRGC103750 (MF919325)]; O. bartii [IRGC100117 (MF919326), IRGC101317 (MF919327), IRGC104102 (MF919328), IRGC105990 (MF919329), IRGC106239 (MF919330), IRGC106294 (MF919331)]; O. nivara [CR100008 (MF919334), CR100400 (MF919335), CR100429 (MF91336), IRGC80547 (MF919332), IRGC81847 (MG725633), IRGC92713 (MF919337), IRGC92930 (MG725634), IRGC100189 (MF919338), IRGC106397 (MF919333)]; O. rufipogon [CR100013 (MG725637), IRGC80610 (MG725635), IRGC81976 (MG725638), IRGC83823 (MG725640), IRGC89224 (MG725641), IRGC99551 (MG725642), IRGC103308 (MF919339), IRGC104308 (MG725643) IRGC104867 (MF966922), IRGC105491 (MG7256360), IRGC105569 (MF966923), IRGC105902 (MF966924), IRGC106162 (MF966925), IRGC106336 (MF966926), IRGC106433 (MF966927), IRGC113652 (MF966928)]; O. longistaminata [IRGC101200 (MG725645), IRGC104301 (MG725646), IRGC105206 (MG725647)]; O. meridionalis [IRGC101146 (MG725648)]; O. glumaepatula [IRGC100184 (MF966930), IRGC104387 (MF966929)]; O. officinalis [IRGC101152 (MF966931), IRGC105674 (MF966932), IRGC106501 (MF966933)]; O. australiensis [IRGC105275 (MG725650)]; O. punctata [IRGC105158 (MG725651)]; O. minuta [IRGC101100 (MG725652), IRGC101128 (MG725653)]; O. latifolia [IRGC105139 (MG725654)]; Feng-Ai-Zhan (MF975521); Kitake (MF975522); Minghui63 (MF975523); Nagina22 (MF975524); PR114 (MF975525); Pusa44 (MF975526).
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形質クラス
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生化学的性質
種子 - 生理的な特色 - 貯蔵物質
種子 - 生理的な特色 - 味覚
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK065102
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MSU ID
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LOC_Os01g07760.1
LOC_Os01g07760.2
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RAP ID
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Os01g0172400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List (Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022 23(4)
Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
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Sun Y., Song K., Liu L., Sun L., Qin Q., Jiang T., Zhou B., Zhu C., Xu G., Sun S., Xue Y.
J. Exp. Bot. 2021
Silencing of Sulfoquinovosyl Diacylglycerol Synthase 1 Impairs the Glycolipids Accumulation and Photosynthesis in Phosphate-deprived Rice.
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Kaur A., Neelam K., Kaur K., Kitazumi A., de Los Reyes BG., Singh K.
Sci Rep 2020 10(1) 6571
Novel allelic variation in the Phospholipase D alpha1 gene (OsPLDalpha1) of wild Oryza species implies to its low expression in rice bran.
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Khan M.S.S., Basnet R., Ahmed S., Bao J., Shu Q.
Plants (Basel) 2020 9(3)
Mutations of <i>OsPLDa1</i> Increase Lysophospholipid Content and Enhance Cooking and Eating Quality in Rice.
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Gong X., Zhang Z., Yue J., Tang W., Tang X., Zeng Z., Niu X., Chen D., Sang X., Xiao F., He G., Liu Y.
Crop Sci. 2018 58 486-506
Phenotypic Characterization, Fine Mapping, and Altered Expression Profiling of roses1 Mutation That Affects Organ Size and Water Loss Through Regulating Stomatal Density in Rice
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Huo C., Zhang B., Wang H., Wang F., Liu M., Gao Y., Zhang W., Deng Z., Sun D., Tang W.
Mol. Cell Proteomics 2016 15(4) 1397-411
Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dalpha1 in Mediating Cold Acclimation Signaling Pathway in Rice.
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Shen P., Wang R., Jing W., Zhang W.
Journal of integrative plant biology 2011 53 289-299
Rice Phospholipase D留 is Involved in Salt Tolerance by the Mediation of H+-ATPase Activity and Transcription
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Suzuki,Y., Takeuchi,Y. and Shirasawa,K.
Crop Sci. 2011
Identification of a seed phospholipase D null allele in rice (Oryza sativa L.) and development of SNP markers for phospholipase D deficiency
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Qi J., Zhou G., Yang L., Erb M., Lu Y., Sun X., Cheng J., Lou Y.
Plant Physiol. 2011 157(4) 1987-99
The Chloroplast-Localized Phospholipases D alpha4 and alpha5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice.
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Li G, Lin F, Xue HW.
Cell Res 2007 17(10) 881-94.
Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
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McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003 44(10) 1013-1026
Rice phospholipase d isoforms show differential cellular location and gene induction.
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Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002 3(1) 2
Molecular diversity of phospholipase D in angiosperms.
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Solinas,G., Pandolfo,D., Valle,G. and Coraggio,I.
Plant Physiol. 1997 114(1) 395-396
The electronic Plant Gene Register.
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Morioka,S., Ueki,J. and Komari,T.
Plant Physiol. 1997 114(1) 396
Characterization of two distinctive genomic clones (Accession Nos. AB001919 and AB001920) for phospholipase D from rice (PGR97-076)
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Ueki,J., Morioka,S., Komari,T. and Kumashiro,T.
Plant Cell Physiol. 1995 36(5) 903-914
Purification and characterization of phospholipase D (PLD) from rice (Oryza sativa L.) and cloning of cDNA for PLD from rice and maize (Zea mays L.).
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TextPresso Search
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Search textpresso for PLDalpha1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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membrane( GO:0016020 )
lipid catabolic process( GO:0016042 )
phosphatidylcholine metabolic process( GO:0046470 )
NAPE-specific phospholipase D activity( GO:0070290 )
phospholipase D activity( GO:0004630 )
calcium ion binding( GO:0005509 )
response to cold( GO:0009409 )
cold acclimation( GO:0009631 )
response to freezing( GO:0050826 )
phosphatidic acid biosynthetic process( GO:0006654 )
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Trait Ontology
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cold tolerance( TO:0000303 )
amylose content( TO:0000196 )
gelatinization temperature( TO:0000462 )
seed quality( TO:0000162 )
peak viscosity( TO:0000409 )
hot paste viscosity( TO:0000408 )
cool paste viscosity( TO:0000379 )
breakdown viscosity( TO:0000374 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2023-07-19 13:26:50.971
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