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Basic Information
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CGSNL 遺伝子シンボル
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HYPRP5
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遺伝子シンボルシノニム
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qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5
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CGSNL 遺伝子名
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HYBRID PROLINE- OR GLYCINE-RICH PROTEIN 5
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遺伝子名シノニム
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低温発芽性 (QTL)-3-1(t), hybrid proline- or glycine-rich protein 5, Hybrid Proline-Rich Protein 5
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タンパク質名
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HYBRID PROLINE- OR GLYCINE-RICH PROTEIN 5
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対立遺伝子
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染色体番号
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3
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解説
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低温発芽生を支配するQTLで、染色体3上のマーカーGBR3001とGBR3002の間に位置する。AB369214, AB369215. AB510406, AB510407. AB433790-AB433805 (O.sativa and other wild rice species).
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形質クラス
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種子 - 生理的な特色 - 休眠性
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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CT835096
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MSU ID
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LOC_Os03g01320.1
LOC_Os03g01320.2
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RAP ID
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Os03g0103300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Kapoor R., Kumar G., Arya P., Jaswal R., Jain P., Singh K., Sharma T.R.
Plants (Basel) 2019 8(9)
Genome-Wide Analysis and Expression Profiling of Rice Hybrid Proline-Rich Proteins in Response to Biotic and Abiotic Stresses, and Hormone Treatment.
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Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
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Fujino K., Obara M., Sato K.
Front Plant Sci 2014 5 489
Diversification of the plant-specific hybrid glycine-rich protein (HyGRP) genes in cereals.
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Fujino K., Sekiguchi H.
Plant Mol. Biol. 2011 75(1-2) 1-10
Origins of functional nucleotide polymorphisms in a major quantitative trait locus, qLTG3-1, controlling low-temperature germinability in rice.
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Hori K., Sugimoto K., Nonoue Y., Ono N., Matsubara K., Yamanouchi U., Abe A., Takeuchi Y., Yano M.
Theor. Appl. Genet. 2010 120 1547-57
Detection of quantitative trait loci controlling pre-harvest sprouting resistance by using backcrossed populations of japonica rice cultivars
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Fujino,K., Sekiguchi,H., Matsuda,Y., Sugimoto,K., Ono,K. and Yano,M.
Proc. Natl. Acad. Sci. U.S.A. 2008 105(34) 12623-12628
Molecular identification of a major quantitative trait locus, qLTG3-1, controlling low temperature germinability in rice
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Fujino, K., H. Sekiguchi, T. Sato, H. Kiuchi, Y. Nonoue, Y. Takeuchi, T. Ando, S.Y. Lin, M. Yano
Theor. Appl. Genet. 2004 108 794-799
Mapping of quantitative trait loci controlling low-temperature germinability in rice (Oryza sativa L.).
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TextPresso Search
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Search textpresso for HYPRP5
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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systemic acquired resistance( GO:0009627 )
defense response to fungus( GO:0050832 )
response to cold( GO:0009409 )
seed germination( GO:0009845 )
abscisic acid mediated signaling( GO:0009738 )
response to salt stress( GO:0009651 )
response to heat( GO:0009408 )
response to abscisic acid stimulus( GO:0009737 )
response to salicylic acid stimulus( GO:0009751 )
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Trait Ontology
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cold tolerance( TO:0000303 )
seed dormancy( TO:0000253 )
abscisic acid sensitivity( TO:0000615 )
salt tolerance( TO:0006001 )
heat tolerance( TO:0000259 )
blast disease( TO:0000074 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2020-03-17 08:23:22.155
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更新情報
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