遺伝子 - 詳細

詳細 - 遺伝子

Basic Information
CGSNL 遺伝子シンボル	PDC1
遺伝子シンボルシノニム	pdc1*, pdc1, pdc4, pdc 1, PDC 1, OsPDC1
CGSNL 遺伝子名	PYRUVATE DECARBOXYLASE 1
遺伝子名シノニム	pyruvate decarboxylase-1, Pyruvate decarboxylase isozyme 1, Pyruvate Decarboxylase 1
タンパク質名	PYRUVATE DECARBOXYLASE 1
対立遺伝子
染色体番号	5
解説	この遺伝子は染色体5上のRFLPマーカー、BCD454AとRZ67の間に位置する。EC=4.1.1.1 Q0DHF6(japonica). A2Y5L9(indica). U07339. U26660. D10413. D22926.
形質クラス	生化学的性質生殖器官 - 穂耐性、抵抗性 - ストレス耐性
発現
Sequence/Locus
cDNA Accession No.	AK100678
MSU ID	LOC_Os05g39310.1
RAP ID	Os05g0469600
Links	Oryzabase Chromosome View ( IRGSP 1.0 / Build5 ) RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List (Test version)	Link to INSD Accession List
マップ
位置情報(cM)
リンケージマップ	Classical linkage map
文献
Kaspary T.E., Roma-Burgos N., Merotto A. Genes (Basel) 2020 11(9) Snorkeling Strategy: Tolerance to Flooding in Rice and Potential Application for Weed Management.
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S. Gene 2018 675 285-300 Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
Tsuji H, Saika H, Tsutsumi N, Hirai A, Nakazono M. Plant Cell Physiol. 2006 47(7) 995-1003 Dynamic and reversible changes in histone H3-Lys4 methylation and H3 acetylation occurring at submergence-inducible genes in rice.
Huq, E., S. Harrington, M.A. Hossain, F. Wen, S.R. McCouch and T.K. Hodges Theor. Appl. Genet. 1999 98 815-824 Molecular characterization of pdc2 and mapping of three pdc genes from rice.
Hossain,M.A., Huq,E., Grover,A., Dennis,E.S., Peacock,W.J. and Hodges,T.K. Plant Mol. Biol. 1996 31(4) 761-770 Characterization of pyruvate decarboxylase genes from rice.
Umeda,M., Hara,C., Matsubayashi,Y., Li,H.H., Liu,Q., Tadokoro,F., Aotsuka,S. and Uchimiya,H. Plant Mol. Biol. 1994 25(3) 469-478 Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E. Plant J. 1994 6(4) 615-624 Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Hossain,M.A., Huq,E., Hodges,T.K. and E. Plant Physiol. 1994 106(2) 799-800 Sequence of a cDNA from Oryza sativa (L.) encoding the pyruvate decarboxylase 1 gene.
Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A. Plant J. 1992 2(6) 1005-1009 Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
TextPresso Search	Search textpresso for PDC1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID	GR:0060607
オントロジー
Gene Ontology	response to flooding( GO:0009413 ) magnesium ion binding( GO:0000287 ) thiamin pyrophosphate binding( GO:0030976 ) plastid( GO:0009536 ) pyruvate decarboxylase activity( GO:0004737 ) inflorescence development( GO:0010229 )
Trait Ontology	inflorescence development trait( TO:0000621 ) flooding related trait( TO:0000114 )
Plant Ontology	inflorescence development stage( PO:0001083 )
関連系統
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形質画像
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更新日
2022-07-05 10:57:44.84

Rice Database Oryzabase

遺伝子 - 詳細

詳細 - 遺伝子