更新情報遺伝子 - 詳細
詳細 - 遺伝子
フィードバックはこちら| Basic Information | |
|---|---|
| CGSNL 遺伝子シンボル | VTE2 |
| 遺伝子シンボルシノニム | OsVTE2, SGD1, OsSGD1, RTD1, OsRTD1, OsHPT, HPT |
| CGSNL 遺伝子名 | VITAMIN E DEFICIENT 2 |
| 遺伝子名シノニム | small grain and dwarf1, small grain and dwarf 1, Rice tocopherol de chancy 1, homogentisate phytyltransferase |
| タンパク質名 | HOMOGENTISATE PHYTYLTRANSFERASE |
| 対立遺伝子 | sgd1, sgd1-1, sgd1-2, rtd1 |
| 染色体番号 | 6 |
| 解説 | B7FA90. vitamin E biosynthetic enzyme. GO:0071555: cell wall organization. GO:0099402: plant organ development. TO:0000975: grain width. |
| 形質クラス |
生化学的性質
栄養器官 - 稈 種子 - 形態学的な特色 耐性、抵抗性 - ストレス耐性 |
| 発現 | |
| Sequence/Locus | |
| cDNA Accession No. |
AK243323
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| MSU ID |
LOC_Os06g44840.1
LOC_Os06g44840.2 |
| RAP ID |
Os06g0658900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| マップ | |
| 位置情報(cM) | |
| リンケージマップ | Classical linkage map |
| 文献 | |
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7) The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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Zhang Y., Liu K., Zhu X., Wu Y., Zhang S., Chen H., Ling J., Wang Y., Fang X.
Plant Cell Rep. 2018 37(5) 775-787 Rice tocopherol deficiency 1 encodes a homogentisate phytyltransferase essential for tocopherol biosynthesis and plant development in rice.
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Wang D., Wang Y., Long W., Niu M., Zhao Z., Teng X., Zhu X., Zhu J., Hao Y., Wang Y., Liu Y., Jiang L., Wang Y., Wan J.
Plant Sci. 2017 260 90-100 SGD1, a key enzyme in tocopherol biosynthesis, is essential for plant development and cold tolerance in rice.
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Hwang J.E., Ahn J.W., Kwon S.J., Kim J.B., Kim S.H., Kang S.Y., Kim D.S.
Mol. Biol. Rep. 2014 41(11) 7671-81 Selection and molecular characterization of a high tocopherol accumulation rice mutant line induced by gamma irradiation.
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| TextPresso Search | Search textpresso for VTE2 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| オントロジー | |
| Gene Ontology |
sulfur amino acid metabolic process( GO:0000096 )
glycine catabolic process( GO:0006546 ) unsaturated fatty acid biosynthetic process( GO:0006636 ) oxidoreduction coenzyme metabolic process( GO:0006733 ) cellular amino acid biosynthetic process( GO:0008652 ) aromatic amino acid family metabolic process( GO:0009072 ) lipoate metabolic process( GO:0009106 ) coenzyme biosynthetic process( GO:0009108 ) nucleotide metabolic process( GO:0009117 ) response to temperature stimulus( GO:0009266 ) response to light stimulus( GO:0009416 ) chloroplast thylakoid membrane( GO:0009535 ) jasmonic acid biosynthetic process( GO:0009695 ) phloem loading( GO:0009915 ) leaf morphogenesis( GO:0009965 ) homogentisate phytyltransferase activity( GO:0010176 ) vitamin E biosynthetic process( GO:0010189 ) chlorophyll metabolic process( GO:0015994 ) integral to membrane( GO:0016021 ) regulation of lipid metabolic process( GO:0019216 ) isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway( GO:0019288 ) secondary metabolic process( GO:0019748 ) cell differentiation( GO:0030154 ) regulation of defense response( GO:0031347 ) oxylipin biosynthetic process( GO:0031408 ) sulfur compound biosynthetic process( GO:0044272 ) positive regulation of transcription, DNA-dependent( GO:0045893 ) response to oxidative stress( GO:0006979 ) unidimensional cell growth( GO:0009826 ) response to cold( GO:0009409 ) chloroplast( GO:0009507 ) response to gibberellin stimulus( GO:0009739 ) gibberellic acid mediated signaling( GO:0009740 ) carbohydrate export( GO:0033231 ) |
| Trait Ontology |
seed longevity( TO:0000435 )
oxidative stress( TO:0002657 ) plant height( TO:0000207 ) grain size( TO:0000397 ) 1000-seed weight( TO:0000382 ) panicle size( TO:0006032 ) leaf size( TO:0002637 ) internode length( TO:0000145 ) spikelet number( TO:0000456 ) panicle number( TO:0000152 ) gibberellic acid sensitivity( TO:0000166 ) total soluble sugar content( TO:0000340 ) panicle length( TO:0000040 ) spikelets per panicle length( TO:0000565 ) grain length( TO:0000734 ) grain thickness( TO:0000399 ) 1000-dehulled grain weight( TO:0000592 ) tiller number( TO:0000346 ) cold tolerance( TO:0000303 ) light sensitivity( TO:0000075 ) |
| Plant Ontology |
phyllome( PO:0006001 )
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| 関連系統 | |
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| 形質画像 | |
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| 更新日 | |
| 2022-03-07 14:42:24.021 | |
