遺伝子 - 詳細
詳細 - 遺伝子
Basic Information | |
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CGSNL 遺伝子シンボル | PUB16 |
遺伝子シンボルシノニム | OsPUB16, OsPUB16, PUB16 |
CGSNL 遺伝子名 | PLANT U-BOX-CONTAINING PROTEIN 16 |
遺伝子名シノニム | plant U-box-containing protein 16, U-box protein 16, U-box-type E3 ubiquitin ligase 16, PLANT U-BOX PROTEIN 16 |
タンパク質名 | PLANT U-BOX-CONTAINING PROTEIN 16 |
対立遺伝子 | ospub16, ospub16-1, ospub16-2 |
染色体番号 | 1 |
解説 | class II PUB protein (U-box + ARM/HEAT). EST: CF326076. GO:0080148: negative regulation of response to water deprivation. GO:2000060: positive regulation of ubiquitin-dependent protein catabolic process. GO:2000038: regulation of stomatal complex development. TO:0020095: stomatal process related trait. |
形質クラス |
生化学的性質
栄養器官 - 葉 耐性、抵抗性 - ストレス耐性 QTLの特性 - 植物成長活動 |
発現 | |
Sequence/Locus | |
cDNA Accession No. |
AK072566
|
MSU ID |
LOC_Os01g66130.1
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RAP ID |
Os01g0884400 |
Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
INSD Accession List (Test version) |
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マップ | |
位置情報(cM) | |
リンケージマップ | Classical linkage map |
文献 | |
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Lv Q., Li X., Jin X., Sun Y., Wu Y., Wang W., Huang J.
PLoS Genet. 2022 18(11) e1010520 Rice OsPUB16 modulates the 'SAPK9-OsMADS23-OsAOC' pathway to reduce plant water-deficit tolerance by repressing ABA and JA biosynthesis.
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Kim M.S., Kang K.K., Cho Y.G.
Int J Mol Sci 2021 22(21) Molecular and Functional Analysis of U-box E3 Ubiquitin Ligase Gene Family in Rice (<i>Oryza</i><i>sativa</i>).
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Yoo Y.H., Jiang X., Jung K.H.
Plants (Basel) 2020 9(9) An Abiotic Stress Responsive U-Box E3 Ubiquitin Ligase Is Involved in OsGI-Mediating Diurnal Rhythm Regulating Mechanism.
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Li-Rong Zeng, Chan Ho Park, R C Venu, Gough J., Guo-Liang Wang
Mol Plant 2008 1(5) 800-15 Classification, expression pattern, and E3 ligase activity assay of rice U-box-containing proteins.
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TextPresso Search | Search textpresso for PUB16 ( Recent references may be retrievable, but without any warranty ) |
DB Reference | |
Gramene ID | - |
オントロジー | |
Gene Ontology |
water homeostasis( GO:0030104 )
proteasomal ubiquitin-dependent protein catabolic process( GO:0043161 ) abscisic acid mediated signaling( GO:0009738 ) jasmonic acid mediated signaling pathway( GO:0009867 ) regulation of stomatal movement( GO:0010119 ) stomatal complex development( GO:0010374 ) response to oxidative stress( GO:0006979 ) response to jasmonic acid stimulus( GO:0009753 ) response to abscisic acid stimulus( GO:0009737 ) positive regulation of protein catabolic process( GO:0045732 ) protein ubiquitination( GO:0016567 ) nucleus( GO:0005634 ) cytoplasm( GO:0005737 ) regulation of jasmonic acid biosynthetic process( GO:0080141 ) negative regulation of abscisic acid biosynthetic process( GO:0090359 ) response to water deprivation( GO:0009414 ) ubiquitin-protein ligase activity( GO:0004842 ) circadian rhythm( GO:0007623 ) ubiquitin ligase complex( GO:0000151 ) |
Trait Ontology |
drought tolerance( TO:0000276 )
growth and development trait( TO:0000357 ) abscisic acid sensitivity( TO:0000615 ) jasmonic acid sensitivity( TO:0000172 ) oxidative stress( TO:0002657 ) stomatal frequency( TO:0000566 ) |
Plant Ontology |
shoot apical meristem( PO:0020148 )
leaf( PO:0025034 ) |
関連系統 | |
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形質画像 | |
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更新日 | |
2023-05-31 14:14:08.765 |