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Basic Information
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CGSNL 遺伝子シンボル
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B2
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遺伝子シンボルシノニム
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OsbHLH016, Kala4, OsKala4, OSB2, OsB2
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CGSNL 遺伝子名
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_
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遺伝子名シノニム
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basic helix-loop-helix protein 016, Key gene for
black coloration by anthocyanin accumulation on chromosome 4
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タンパク質名
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対立遺伝子
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染色体番号
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4
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解説
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AB021080. Both Pb (PURPLE PERICARP B) and Kala4 map to a region between RM1354 and RM7210 on chromosome 4 and it is suggest that Pb is an allele of Kala4 (Maeda et al. 2014). an R/B-type regulatory gene. OSB1 (Os04g0557800) and OSB2 (Os04g0557500) are the major components of the Plw allele (Sakamoto et al. 2001). TO:0001109: grain color trait.
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形質クラス
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着色 - アントシアニン
種子
種子 - 形態学的な特色
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発現
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Sequence/Locus
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cDNA Accession No.
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AB021080
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MSU ID
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LOC_Os04g47059.1
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RAP ID
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Os04g0557500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Kim D.H., Yang J., Ha S.H., Kim J.K., Lee J.Y., Lim S.H.
Front Plant Sci 2021 12 765049
An OsKala3, R2R3 MYB TF, Is a Common Key Player for Black Rice Pericarp as Main Partner of an OsKala4, bHLH TF.
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Mackon E., Ma Y., Jeazet Dongho Epse Mackon GC., Usman B., Zhao Y., Li Q., Liu P.
Genes (Basel) 2021 12(4)
Computational and Transcriptomic Analysis Unraveled <i>OsMATE34</i> as a Putative anthocyanin transporter in Black Rice (<i>Oryza sativa</i> L.) Caryopsis.
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Yang X., Wang J., Xia X., Zhang Z., He J., Nong B., Luo T., Feng R., Wu Y., Pan Y., Xiong F., Zeng Y., Chen C., Guo H., Xu Z., Li D., Deng G.
Plant J. 2021 107(1) 198-214
OsTTG1, a WD40 repeat gene, regulates anthocyanin biosynthesis in rice.
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Oshima M., Taniguchi Y., Akasaka M., Abe K., Ichikawa H., Tabei Y., Tanaka J.
Breed. Sci. 2019 69(2) 244-254
Development of a visible marker trait based on leaf sheath-specific anthocyanin pigmentation applicable to various genotypes in rice.
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Oikawa T., Maeda H., Oguchi T., Yamaguchi T., Tanabe N., Ebana K., Yano M., Ebitani T., Izawa T.
Plant Cell 2015 27(9) 2401-14
The Birth of a Black Rice Gene and Its Local Spread by Introgression.
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Maeda H., Yamaguchi T., Omoteno M., Takarada T., Fujita K., Murata K., Iyama Y., Kojima Y., Morikawa M., Ozaki H., Mukaino N., Kidani Y., Ebitani T.
Breed. Sci. 2014 64(2) 134-41
Genetic dissection of black grain rice by the development of a near isogenic line.
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Shih CH, Chu H, Tang LK, Sakamoto W, Maekawa M, Chu IK, Wang M, Lo C.
Planta. 2008 228(6) 1043-54.
Functional characterization of key structural genes in rice flavonoid biosynthesis.
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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W Sakamoto, T Ohmori, K Kageyama, C Miyazaki, A Saito, M Murata, K Noda, M Maekawa
Plant Cell Physiol. 2001 42(9) 982-91
The Purple leaf (Pl) locus of rice: the Pl(w) allele has a complex organization and includes two genes encoding basic helix-loop-helix proteins involved in anthocyanin biosynthesis.
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TextPresso Search
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Search textpresso for B2
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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positive regulation of transcription, DNA-dependent( GO:0045893 )
nucleus( GO:0005634 )
positive regulation of anthocyanin biosynthetic process( GO:0031542 )
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Trait Ontology
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pericarp color( TO:0000707 )
anthocyanin content( TO:0000071 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2023-02-28 14:23:39.603
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更新情報
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