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Basic Information
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CGSNL 遺伝子シンボル
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CHI3
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遺伝子シンボルシノニム
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gh1, GH1, OsGH1, OsCHI, Cfi, CHI, OsCHI3
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CGSNL 遺伝子名
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CHALCONE ISOMERASE 3
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遺伝子名シノニム
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gold hull and internode 1, chalcone isomerase, chalcone flavonone isomerase, chalcone-flavonone isomerase
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タンパク質名
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CHALCONE ISOMERASE 3
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対立遺伝子
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gh1
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染色体番号
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3
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解説
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Q84T92. AF474922. lodging resistance. TO:0001109: grain color trait.
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形質クラス
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生化学的性質
種子
着色 - アントシアニン
種子 - 形態学的な特色
栄養器官 - 稈
耐性、抵抗性 - 害虫抵抗性
着色 - その他
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK061390
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MSU ID
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LOC_Os03g60509.1
LOC_Os03g60509.2
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RAP ID
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Os03g0819600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Wang J., Zhang C., Li Y.
Genes (Basel) 2022 13(3)
Genome-Wide Identification and Expression Profiles of 13 Key Structural Gene Families Involved in the Biosynthesis of Rice Flavonoid Scaffolds.
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Kim D.H., Yang J., Ha S.H., Kim J.K., Lee J.Y., Lim S.H.
Front Plant Sci 2021 12 765049
An OsKala3, R2R3 MYB TF, Is a Common Key Player for Black Rice Pericarp as Main Partner of an OsKala4, bHLH TF.
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Park S.I., Park H.L., Bhoo S.H., Lee S.W., Cho M.H.
Plants (Basel) 2021 10(10)
Biochemical and Molecular Characterization of the Rice Chalcone Isomerase Family.
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Qiao W., Wang Y., Xu R., Yang Z., Sun Y., Su L., Zhang L., Wang J., Huang J., Zheng X., Liu S., Tian Y., Chen L., Liu X., Lan J., Yang Q.
Theor. Appl. Genet. 2021 134(5) 1531-1543
A functional chromogen gene C from wild rice is involved in a different anthocyanin biosynthesis pathway in indica and japonica.
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Xue J., Lu D., Wang S., Lu Z., Liu W., Wang X., Fang Z., He X.
Sci Rep 2021 11(1) 14083
Integrated transcriptomic and metabolomic analysis provides insight into the regulation of leaf senescence in rice.
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Mackon E., Ma Y., Jeazet Dongho Epse Mackon GC., Usman B., Zhao Y., Li Q., Liu P.
Genes (Basel) 2021 12(4)
Computational and Transcriptomic Analysis Unraveled <i>OsMATE34</i> as a Putative anthocyanin transporter in Black Rice (<i>Oryza sativa</i> L.) Caryopsis.
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Dong N.Q., Sun Y., Guo T., Shi C.L., Zhang Y.M., Kan Y., Xiang Y.H., Zhang H., Yang Y.B., Li Y.C., Zhao H.Y., Yu H.X., Lu Z.Q., Wang Y., Ye W.W., Shan J.X., Lin H.X.
Nat Commun 2020 11(1) 2629
UDP-glucosyltransferase regulates grain size and abiotic stress tolerance associated with metabolic flux redirection in rice.
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Miyamoto T., Takada R., Tobimatsu Y., Takeda Y., Suzuki S., Yamamura M., Osakabe K., Osakabe Y., Sakamoto M., Umezawa T.
Plant J. 2019 98(6) 975-987
OsMYB108 loss-of-function enriches p-coumaroylated and tricin lignin units in rice cell walls.
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Zheng J., Wu H., Zhu H., Huang C., Liu C., Chang Y., Kong Z., Zhou Z., Wang G., Lin Y., Chen H.
New Phytol. 2019 223(2) 705-721
Determining factors, regulation system, and domestication of anthocyanin biosynthesis in rice leaves.
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Chen X., Tao Y., Ali A., Zhuang Z., Guo D., Guo Q., Riaz A., Zhang H., Xu P., Liao Y., Wang J., Sun C., Xiang Q., Wu X.
Int J Mol Sci 2019 20(10)
Transcriptome and Proteome Profiling of Different Colored Rice Reveals Physiological Dynamics Involved in the Flavonoid Pathway.
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Oshima M., Taniguchi Y., Akasaka M., Abe K., Ichikawa H., Tabei Y., Tanaka J.
Breed. Sci. 2019 69(2) 244-254
Development of a visible marker trait based on leaf sheath-specific anthocyanin pigmentation applicable to various genotypes in rice.
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Zaidi S.H.R., Zakari S.A., Zhao Q., Khan A.R., Shah J.M., Cheng F.
Antioxidants (Basel) 2019 8(11)
Anthocyanin Accumulation in Black Kernel Mutant Rice and its Contribution to ROS Detoxification in Response to High Temperature at the Filling Stage.
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Nanda S., Wan P.J., Yuan S.Y., Lai F.X., Wang W.X., Fu Q.
Int J Mol Sci 2018 19(12)
Differential Responses of <i>OsMPK</i>s in IR56 Rice to Two BPH Populations of Different Virulence Levels.
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Hirano K., Masuda R., Takase W., Morinaka Y., Kawamura M., Takeuchi Y., Takagi H., Yaegashi H., Natsume S., Terauchi R., Kotake T., Matsushita Y., Sazuka T.
Planta 2017
Screening of rice mutants with improved saccharification efficiency results in the identification of CONSTITUTIVE PHOTOMORPHOGENIC 1 and GOLD HULL AND INTERNODE 1.
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Chen X., Itani T., Wu X., Chikawa Y., Irifune K.
Plant Signal Behav 2013 8(12) e27555
Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties.
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Ogo Y., Ozawa K., Ishimaru T., Murayama T., Takaiwa F.
Plant Biotechnol. J. 2013 11(6) 734-46
Transgenic rice seed synthesizing diverse flavonoids at high levels: a new platform for flavonoid production with associated health benefits.
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Hong L., Qian Q., Tang D., Wang K., Li M., Cheng Z.
Planta 2012 236(1) 141-51
A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype.
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Shih CH, Chu H, Tang LK, Sakamoto W, Maekawa M, Chu IK, Wang M, Lo C.
Planta. 2008 228(6) 1043-54.
Functional characterization of key structural genes in rice flavonoid biosynthesis.
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Druka,A., Kudrna,D., Rostoks,N., Brueggeman,R., D. and Kleinhofs,A.
Gene 2003 302(1-2) 171-178
Chalcone isomerase gene from rice (Oryza sativa) and barley (Hordeum vulgare): physical, genetic and mutation mapping.
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TextPresso Search
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Search textpresso for CHI3
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to UV( GO:0009411 )
flavonoid biosynthetic process( GO:0009813 )
chalcone isomerase activity( GO:0045430 )
response to light stimulus( GO:0009416 )
lignin biosynthetic process( GO:0009809 )
response to abiotic stimulus( GO:0009628 )
defense response to insect( GO:0002213 )
defense response, incompatible interaction( GO:0009814 )
anthocyanin biosynthetic process( GO:0009718 )
seed development( GO:0048316 )
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Trait Ontology
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light sensitivity( TO:0000075 )
pericarp color( TO:0000707 )
culm color( TO:0000534 )
pigment content( TO:0000494 )
grain yield( TO:0000396 )
abiotic stress trait( TO:0000168 )
lignin content( TO:0000731 )
lignin biosynthesis trait( TO:0000733 )
flavonoid content( TO:0000290 )
ferulic acid content( TO:0000675 )
brown planthopper resistance( TO:0000424 )
seed development trait( TO:0000653 )
stem strength( TO:0000051 )
anthocyanin content( TO:0000071 )
UV light sensitivity( TO:0000160 )
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Plant Ontology
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seed development stage( PO:0001170 )
leaf( PO:0025034 )
inflorescence( PO:0009049 )
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関連系統
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形質画像
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更新日
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2023-02-21 11:08:30.818
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更新情報
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