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Basic Information
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CGSNL 遺伝子シンボル
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HAP3K
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遺伝子シンボルシノニム
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OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, NF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41
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CGSNL 遺伝子名
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HAP3K SUBUNIT OF CCAAT-BOX BINDING COMPLEX
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遺伝子名シノニム
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Nuclear transcription factor Y subunit B-1, CCAAT-binding transcription factor subunit NF-YB1, leafy cotyledon 1, endosperm-specific gene 41, Nuclear Factor YB1, NUCLEAR FACTOR-Y subunit B1, NUCLEAR FACTOR-Y subunit NF-YB1, NF-YB subunit 1, NF-YB family 1
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タンパク質名
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HAP3 SUBUNIT OF CCAAT-BOX BINDING COMPLEX
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対立遺伝子
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osnf-yb1, osnf-yb1-1, osnf-yb1-2, crnf-yb1, crnf-yb1-4, crnf-yb1-7, crnf-yb1-9
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染色体番号
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2
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解説
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AJ300218. NF-YB, CBF-A. Q6Z348. GO:2000014: regulation of endosperm development. GO:2000034: regulation of seed maturation.
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形質クラス
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種子 - 形態学的な特色
種子 - 形態学的な特色 - 胚乳
種子 - 形態学的な特色 - 粒形
種子 - 生理的な特色 - 貯蔵物質
その他
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発現
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Sequence/Locus
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cDNA Accession No.
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AK241920
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MSU ID
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LOC_Os02g49410.1
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RAP ID
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Os02g0725900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Liu Z., Li P., Yu L., Hu Y., Du A., Fu X., Wu C., Luo D., Hu B., Dong H., Jiang H., Ma X., Huang W., Yang X., Tu S., Li H.
Int J Mol Sci 2023 24(9)
<i>OsMADS1</i> Regulates Grain Quality, Gene Expressions, and Regulatory Networks of Starch and Storage Protein Metabolisms in Rice.
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Xu X., E Z., Zhang D., Yun Q., Zhou Y., Niu B., Chen C.
Plant Physiol. 2021 185(3) 934-950
OsYUC11-mediated auxin biosynthesis is essential for endosperm development of rice.
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Zhang D., Zhang M., Liang J.
Front Plant Sci 2021 12 585174
RGB1 Regulates Grain Development and Starch Accumulation Through Its Effect on <i>OsYUC11</i>-Mediated Auxin Biosynthesis in Rice Endosperm Cells.
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Niu B., Deng H., Li T., Sharma S., Yun Q., Li Q., E Z., Chen C.
J Integr Plant Biol 2020 62(12) 1983-1996
OsbZIP76 interacts with OsNF-YBs and regulates endosperm cellularization in rice (Oryza sativa).
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Paul P., Dhatt B.K., Miller M., Folsom J.J., Wang Z., Krassovskaya I., Liu K., Sandhu J., Yu H., Zhang C., Obata T., Staswick P., Walia H.
Plant Physiol. 2020 182(2) 933-948
<i>MADS78</i> and <i>MADS79</i> Are Essential Regulators of Early Seed Development in Rice.
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Bello B.K., Hou Y., Zhao J., Jiao G., Wu Y., Li Z., Wang Y., Tong X., Wang W., Yuan W., Wei X., Zhang J.
Plant Biotechnol. J. 2019 17(7) 1222-1235
NF-yb1-YC12-bHLH144 complex directly activates Wx to regulate grain quality in rice (Oryza sativa L.).
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Xiong Y., Ren Y., Li W., Wu F., Yang W., Huang X., Yao J.
J. Exp. Bot. 2019 70(15) 3765-3780
NF-YC12 is a key multi-functional regulator of accumulation of seed storage substances in rice.
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E Z., Li T., Zhang H., Liu Z., Deng H., Sharma S., Wei X., Wang L., Niu B., Chen C.
J. Exp. Bot. 2018 69(10) 2495-2510
A group of Nuclear factor Y transcription factors are sub-functionalized during endosperm development in monocots.
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Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017 5(1) 21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
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Xu J.J., Zhang X.F., Xue H.W.
J. Exp. Bot. 2016 67(22) 6399-6411
Rice aleurone layer specific OsNF-YB1 regulates grain filling and endosperm development by interacting with an ERF transcription factor.
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Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016 67(6) 1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
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Sun X., Ling S., Lu Z., Ouyang Y.D., Liu S., Yao J.
Gene 2014 551(2) 214-21
OsNF-YB1, a rice endosperm-specific gene, is essential for cell proliferation in endosperm development.
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Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013 530(2) 236-47
Genome-wide analysis of endosperm-specific genes in rice.
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Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012 24(12) 4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
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Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008 279(3) 279-289
Identification, characterization and interaction of HAP family genes in rice
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Masiero S, Imbriano C, Ravasio F, Favaro R, Pelucchi N, Gorla MS, Mantovani R, Colombo L, Kater MM.
J. Biol. Chem. 2002 277(29) 26429-35.
Ternary complex formation between MADS-box transcription factors and the histone fold protein NF-YB.
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TextPresso Search
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Search textpresso for HAP3K
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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regulation of auxin biosynthetic process( GO:0010600 )
regulation of starch biosynthetic process( GO:0010581 )
seed development( GO:0048316 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
cell proliferation( GO:0008283 )
endosperm development( GO:0009960 )
sequence-specific DNA binding( GO:0043565 )
seed maturation( GO:0010431 )
regulation of transcription( GO:0045449 )
cytosol( GO:0005829 )
cytoplasm( GO:0005737 )
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Trait Ontology
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seed development trait( TO:0000653 )
seed maturation( TO:0002661 )
grain size( TO:0000397 )
chalky endosperm( TO:0000266 )
seed quality( TO:0000162 )
seed anatomy and morphology trait( TO:0000184 )
seed size( TO:0000391 )
auxin content( TO:0002672 )
amylose content( TO:0000196 )
starch content( TO:0000696 )
fat and essential oil content( TO:0000604 )
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Plant Ontology
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endosperm( PO:0009089 )
seed maturation stage( PO:0007632 )
endosperm development stage( PO:0007633 )
aleurone layer( PO:0005360 )
seed development stage( PO:0001170 )
central endosperm( PO:0006220 )
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関連系統
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形質画像
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更新日
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2023-08-31 09:27:56.062
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更新情報
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