cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK060757
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os09g0440300
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
9
|
|
RAP - Location, Length
|
17036128 -
17044461
( - );
8334(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
17036128 -
17036489
( - );
362 (bp)
|
|
Exon 2
|
Location |
17038790 -
17038939
( - );
150 (bp)
|
|
Exon 3
|
Location |
17039523 -
17039620
( - );
98 (bp)
|
|
Exon 4
|
Location |
17039740 -
17039880
( - );
141 (bp)
|
|
Exon 5
|
Location |
17040351 -
17040515
( - );
165 (bp)
|
|
Exon 6
|
Location |
17040591 -
17040767
( - );
177 (bp)
|
|
Exon 7
|
Location |
17040980 -
17041160
( - );
181 (bp)
|
|
Exon 8
|
Location |
17041434 -
17041479
( - );
46 (bp)
|
|
Exon 9
|
Location |
17041828 -
17041891
( - );
64 (bp)
|
|
Exon 10
|
Location |
17041981 -
17042003
( - );
23 (bp)
|
|
Exon 11
|
Location |
17042614 -
17042686
( - );
73 (bp)
|
|
Exon 12
|
Location |
17043060 -
17043191
( - );
132 (bp)
|
|
Exon 13
|
Location |
17043993 -
17044078
( - );
86 (bp)
|
|
Exon 14
|
Location |
17044212 -
17044461
( - );
250 (bp)
|
Chromosome: 9
, position: 17,036,128
- 17,044,461
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 agccaccgcc tcccccaccc caccccgatc ccctccccgc cgtacgggcg cagaaggaac
000061 ccgtcttcta gaaggaggag gagggctacc tctctctctc tctcttctgc catggggagc
000121 ttcgcgagga aggagcacca gttcctcgcc gagcttggcc tcgcgccgcg gaaccccggg
000181 tccttcgcct gcggcgcctg gggcggctcg ggccccgtcg tcacgtccac caacccgacg
000241 aacaaccagg cgcgtctccc cccacacgat ccgctcggtt ctaggcgctc gatttggttt
000301 gggccgccct ggcatttttg gggtgtgtgt gattgtggtg gattttgatg ggggattttt
000361 ttttgggtgt tttgtggttt aggtcatcgc ggaggtcgtg gaggcgtccg cgcgtgagta
000421 cgaggagggc atgcgcgcct gctacgatgc cgccaagacc tggatggcgg tgagtttcac
000481 ttgacttgct gtgttggagt gctgatatca attcgttcgg atgatgaagt gctcgtacta
000541 tgctcttgtg tgtcatttgc tattttctgc tgcgtgagag atctgactgt gtggaaacca
000601 gcaattgtgc aattcgaaac gttgcgatat tatttgtttg gaaatgctgc ctcaaaaccc
000661 tgtaacttgg gtgttttggg ggtttcagct tttggttaca gccttacagg aatctgagtc
000721 tgctatagcg ctctaatgca gcaaacagtg ttcggtactg tacctaattt actgtacatg
000781 ataatcatta ctgtagcgaa agtgatgtaa caactcacct ttaccattag tccgttaata
000841 aacgacaagg atcaagggct aattcctggt actatagccc tatgccgtag catggtgcta
000901 catcagagga tctccttcct ttgagaaggt ggtatggact cgttatatga ttcaggaaca
000961 ccaaaaatct gatataaaat gggaaatggc aaagtaacag tatgtccgat gttaaaatgc
001021 tgataaagta gagactgtgt gcaatgtgca cactacgatt tcatatttca tacatgtttt
001081 aatttataag attgtgatat caaaatttaa ttaaaataca catgtatgta taagcacact
001141 atgatgtata gaagctagca gcactgttat gatgcaaaaa ttcaaatatg tggaagaagc
001201 gcagctgaga tccctttttt taagttattt tattgtaaaa ctactaacag ttacatatta
001261 atatgtccag attccagctc caaagcgagg agaaattgtt aggcaaattg gtgatgcatt
001321 gagagcaaag ctccatcacc tgggcaggct tgtgtcactt gagatgggga aaattcttcc
001381 tgaagggatt ggagaggttc aggtaggtat aattgccgcc agttcttcca ctcagagctt
001441 cattgttttt tgcactcagg ataggaaatg accactatat tgtgtttctt cagaatattc
001501 agtgatttat ctttagaaca ttaatggtgt gctcatcacg aatgcttcat tatcatcaat
001561 accttgcctg ctagaattac caacttagcc cctaacatga tatgcagttg tgtttccttt
001621 tctctctgtt aatcatcttt ctgccaatcg aatgtcttgc ctaagaattt ggccattatt
001681 gagataattt catgatcgaa tatttaactg cgactattga ttctccacca tgaaggcatg
001741 attatgttga cataaatgta acctctgttt tgtaggaaat cattgacatg tgtgattatg
001801 ctgtgggcct aagtcgccag ctaaatgggt ccatcatacc atctgaacgt aagcccattc
001861 tccctttcct aatttatatc tgatgcccgc ttcaaagtat gataacagca gatacttctg
001921 atcatatttt ctctatttgg ttgagataca aatattatta tatcttaatt ctgtctgaaa
001981 aagaatacct caattgattt aggtttccag gttttctaat gaaattagta cttcattaga
002041 ataagcaatt ttactccatt attactaatt cgctctctgg attatttcat gttaagtgat
002101 tctccatttc actaatttga acacacaata tacttgccat tctagtttac tgttctatac
002161 aaaatcctgt cccttgacat gccataccac cattacttat caaaatgtgc catcacacga
002221 ttttctgtag taatgataag atattcgctg attgtccgtt agacagcaat attttacaga
002281 gttatgccca aattatcacc attggttttt gtggttagga tagaaggttg agccatggcg
002341 ttctcaattg tagtaatgtt gccatttatt catacttatg ggattgtaaa attcatcaat
002401 gctctgtttg ataagtatac tggaagattt tctaatgctg tcttctactt tttttcaggc
002461 ccgaatcata tgatgatgga ggtaggcaca aaccagttct tttaactcca gatttacttt
002521 ctctgtttct catgtggaag aaagctaatc cctaaagctc attcaaatag gtgtggaatc
002581 ctcttggagt tgttggtgtt atcacagcat tcaattttcc ttgtgctgtg ctgggtaagt
002641 gtcttctctt agaatatcat tagtgaaatc aacttagtgc attgcaattc cctgttattt
002701 acccctacat actcttgatc tatcaaatgc aaaattgaca agaacttgac ctattgaaaa
002761 ttaactgtta taatccaatg agtagccgtg tccatataat aggatcttca aggtgtcaat
002821 ttagccgctt actcttttgt ttatgatata catgatatgt tgcatgttta tgctataatc
002881 ttttgaatgc tatggtgctg gcgaccttta tcacatgctc aaattcttgt aatccttaac
002941 agcgactaat acatcaatta tttccttttt gtcatatttt aggttggaat gcctgcatag
003001 ctttggtatg tggaaactgt gttgtctggt aagaatgatt tcctttctcc ataaactgaa
003061 agtactgtcc tactacatgt tatcagtact gtaactttct ttacttatat tatggatgag
003121 agtatgctct taagttgtat tctctgaaca tttcaataga tcattagctt agtgttccag
003181 attataataa tttcgtaatg ttcattaaac tggtgaaggt ccattatatc tattgcattt
003241 tccttgcatg aactgtcttg gaactgtcct ttttttgtaa ctaatttcta aacaattgca
003301 ggaaaggtgc tccaactact ccgttgatca ctattgcaat gactaaaata gttgccagtg
003361 tattggagag gaacaacttg ccaggctcaa tttttacagc attctgtggt ggtgctgaca
003421 ttggccaagc aatttctctt gacacaagga tacccttggt ttcattcaca ggaagcacaa
003481 aggtatatac tacagtaaac tgctacctat gtcatctatg catatttcct aatcgatcca
003541 ttttgatata atgacctcca tcacatctcc aatttctatt tccttttgag gtcctttttt
003601 aattctgagc agctttttca agcatttgat aattatatat cattgaactg tgctgatcta
003661 ctgcaaaatt tgtaacactg attgctcaat gcaggttggt ctaatggttc agcagcaagt
003721 gaatgcaaga tttggcaaat gccttcttga acttagtggg aacaatgcca ttattgtaat
003781 ggatgatgca gacattcagc tagctgtccg ttcagtgttg tttgctgctg ttggaacagc
003841 aggacaacgc tgcactacat gtcgtaggct ggtaagatag gtttttctta tctgccccaa
003901 tggctggtgt atgagtagtc taaatgcttt tgttttgtta acacagcttc ttcacgaaag
003961 catataccga acatttcttg atcaacttgt tgaggtttat aaacaagtcc gaattgggga
004021 tcctttggag aatggtacgt tactggggcc attgcacact cctgcttcaa gagacgcctt
004081 cttgaaaggc atccaaacca tcagatctca ggtgatatta ttgatgcaac aacatttgct
004141 tgtgcatcaa tgtctgtttg cattatatta aacaatcttt acatcttcaa tacttaaaat
004201 gcttaagttg gtagtgttga tggcctttct actcctccct ataatctaaa taattcttaa
004261 tatgttagca gtcaaagttt tcttaatttg ttggcagtag tcaaagttaa agatgtttga
004321 ttgcatgctt tctacaaaat tgtatttctg aatgtatgga gtttattatt ccctgaattc
004381 tgaatcttga atgtacatct taaaatgctg tgctactgga agttgttagt tcagtatgtt
004441 taactagaat caatctcatt acatcacata ggcacattgc tgtgaatcta ttagagcgaa
004501 accatttagc atttacctgt ggccttgaat tggttggtga ttttctgtaa gcagtaattt
004561 gactgacatc ctaatttgca ggggggaaaa attctttatg gaggatctgc aattgaatct
004621 gagggaaact ttgttcagcc aacaattgtg gaaatttcac cctctgcacc ggttgtgaga
004681 gaagaactct ttggtcctgt tctttatgtg atgaaagttc aggtataaaa gattcaatta
004741 ctttgctttt atgttattga tctgtaatgt ttggtgtcag ttgtatagtg ttggaccaga
004801 tcattatcat ttacactact tttcgtggtc attacctgca gaatctgaag gaagcagttg
004861 aaatcaacaa ttctgttcct caaggattga gcagttctat atttacaaag agaccagata
004921 ttattttcaa gtggattggg taagtgtcag ttcaaccacc tagaaagtag cccccttgca
004981 gctaagcttg attgttataa atagaaatca aggctcactt tggcactaat ggatctccat
005041 cctcctgctc atatgtagca ttgtgtttcc tgatgtccta aacttgtttt ggtgaaggta
005101 tcagacttgt ttgcttttac tttaatctca ttgtttccct gtttattgaa tcacactgaa
005161 atattattca agtttaacag ttcaaatata cttaggcttt tagacccttt ttccgttatg
005221 tgcattatat gcattattag tgtattaaat tcttttttaa gatgatattt gatgtccata
005281 tatattgaca cctaaaaaga atcataaagc gatttaacac tactgaatcc ccgctatgtg
005341 tcatgactaa atcattgacc atattcctgt gttgtgaaat cccccatata ataaaccctc
005401 ttccgaggac agctgcatgc ctacaccttt cttttacacg ctctcagatt tcttttactg
005461 ccatgcccca taagacatga aatgactatg gtagtgatgt tcttgctctt cttgctgtac
005521 aggcctcatg gtagtgactg tggcattgtt aatgtaaata ttcccacaaa tggtgctgaa
005581 attggtggag cttttggtgg agaaaaagct actggtggtg gacgagaagc agggagtgat
005641 tcgtggaagc agtacatgag gagggccact tggtaagtag acaaattttg attcaagtat
005701 gcaagctata ccttgatcaa ttggtaaaat tcctagttcc ttttgcactt ttcccaagtt
005761 gtcgtttgca acagcagtaa ctgaatattt actgaaatgt aaactgttca ctcccattgg
005821 tgagtggtga ccttggcttg gcatgatggc ttccttagag actctagtac actacaatga
005881 ttagcaaaga gtaaagtcca tcaccggtcc ttaaacttgt accgctgtat catcccggtc
005941 cctaaactcg caaatcgacc gttcaagtcc tcaaacttgt tcgactgtgt catcctagtc
006001 tctaaacttg tagatcactc gtttaggtcc tccaacttat tcagttgtgt caccccggtc
006061 cctaaacagg acggtctaaa aactttatat caaaaaataa ttcataactt tttcatgtga
006121 actctgaaga caaactttat atcaaaattg tagctctcga cgcgacctac aactttgtag
006181 ttgaaaagtt tttgaattaa aactgtttag ggtcccaaaa tattgttgca tgtttataga
006241 ttttgaaatt ttaattttaa aattacattt tgggacaaaa aatgacttta aataaaaaaa
006301 attcaactac aaagttgtag atcgcgtcga gggctacaag tttgatataa agtttgtctt
006361 cattagaatt catatgaaaa agttatgaat tatttttaaa tataaagtct ttagaccatc
006421 ctatttgacc cagatgatat tcaaatccaa gtttagggac cggggtgaca caaccgaaca
006481 agttggagga cctaaatgag tgatctgcaa gtttagggac cgggatgaca tagtcgaaca
006541 agtttgagga cctgaacggt cagtttgcga gtttagggac cgggatgaca caacggtaca
006601 agtttaggga ccggtgatgg actttactca ttagcaaaca aggggaacaa ataattgttg
006661 ataaattact gtaatgaagt tatcatctgt tggagtctgt gtaagcctgt aaaattgaag
006721 tccctaaggt ggtgtttggc aaggagggac taaactttag tccctctcac aaaaaattta
006781 gtccctatgg gagggacttt tgcttttgtg agagggacta aagtttagtt agggactaat
006841 ttttttgtga gagggactaa agtttagtta gggactaagg tggtgtttgg atccagggac
006901 ttaactttag tctctatatt tagacactaa tttagagtat taaatataga ctacttacaa
006961 aattaattat ataaatgaaa gcaaatttgc gagacaaaat ttttaagcct aattaatcta
007021 taattagaga atgtttactg tagcatcaca taggctaatc atagattaat taggctcaat
007081 agattcgtct cgcgaattag tccaagatta tggatgggtt ttattaatag tctacgttta
007141 atatttataa ttagtgcaaa cattcgatgt gatagtgact taaaagtttt agtcccatct
007201 aaacagggtc taattttttt gtgagaggga ctaaagttta gtccctcttt cccaaacacc
007261 acctaactct gtatcaaact gcacggagaa taatttacat aaccgggatc cagccaccac
007321 agtaccttct tttttcactg tgattttgag ttttgaagtt tctggctatt ctctcattga
007381 tgttacgatg tacataaaac taatctacat aaggatgctg taacatttcg gttgtgtaga
007441 caccattacg ccatagaaat gttgtcagaa tatcatctct gccaccgccc accgggctat
007501 tccatgtcat ccattgtgat cattctgacc tgggatagca cttttaccca aaaggccttg
007561 ggagtaccat catacaaata gaagcttaga atgccatgaa gcaataaatt caaatagaac
007621 tacacatata tattactcta ttattagcac tgagaaaacc atttgatttg ctctgccata
007681 tttttcaatg ggtatttgcg acgtcccaaa actctgtgaa gcatagggat cacaatatct
007741 tatgtataga tgttcccaat gaaaggctta tcctatgtac attgaattct agttccttga
007801 gatgtgaacc atgccatgaa gataattact gcaagagtag cttctgttgc aagatattca
007861 gggcaataat tctagtgtgt gttcaccatg ctcgaaatac tttgcataga taattcttta
007921 tgttatagtt atgcatttcc tgcacactaa ttctcaatcc aaatttctgc agtacgatca
007981 actatggaag cgagctgcct ctagcacaag gaataaattt tggctagttc ggtggtcaag
008041 atcggctgat gaacatgtta agcttcatcg acagacttca ggaatttcta ctggcgtcaa
008101 ctgaaaaccg aaacttcaac gcagcagcat tgctatgtgt gcatataata agagatgagt
008161 ccaatattaa tgcatgtact gctcttgcta tgattagccg tcggagttcg agtccaataa
008221 acagggaaaa attgcgtatt ccctgatcgg ttgatatgta ccaacatttc tgatgtaatc
008281 tttagaacgg tatcggttga aaacttgaaa tgaacgaaaa cgcggtaaga atac
|
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
