cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
|
RAP - Accession No.
|
AK111743
Link to RAP-DB
(
IRGSP 1.0
)
|
RAP ID
|
Os06g0275500
(
IRGSP 1.0
)
|
RAP - Chromosome No.
|
6
|
RAP - Location, Length
|
9352714 -
9361033
( + )
;
8320(bp)
|
Exon (Data source : RAP-DB)
|
Exon 1
|
Location |
9352714 -
9353028
( + )
;
315 (bp)
|
Exon 2
|
Location |
9353129 -
9353232
( + )
;
104 (bp)
|
Exon 3
|
Location |
9353341 -
9353660
( + )
;
320 (bp)
|
Exon 4
|
Location |
9354451 -
9354612
( + )
;
162 (bp)
|
Exon 5
|
Location |
9355335 -
9355419
( + )
;
85 (bp)
|
Exon 6
|
Location |
9355536 -
9355685
( + )
;
150 (bp)
|
Exon 7
|
Location |
9355772 -
9355819
( + )
;
48 (bp)
|
Exon 8
|
Location |
9355889 -
9355957
( + )
;
69 (bp)
|
Exon 9
|
Location |
9356081 -
9356784
( + )
;
704 (bp)
|
Exon 10
|
Location |
9357610 -
9357745
( + )
;
136 (bp)
|
Exon 11
|
Location |
9357820 -
9358040
( + )
;
221 (bp)
|
Exon 12
|
Location |
9358539 -
9358670
( + )
;
132 (bp)
|
Exon 13
|
Location |
9359500 -
9359590
( + )
;
91 (bp)
|
Exon 14
|
Location |
9360062 -
9360109
( + )
;
48 (bp)
|
Exon 15
|
Location |
9360188 -
9360316
( + )
;
129 (bp)
|
Exon 16
|
Location |
9360541 -
9361033
( + )
;
493 (bp)
|
Chromosome: 6
, position: 9,352,714
- 9,361,033
bp
|
|
|
Now loading
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 cttccctttc ctccacccac gccgcgacga cgagtcgccg ccgcggcctc gccggcgacc
000061 aggtctccgg cggccccgcc gcccgccgtg acggggctcc ggccttccgc cctcctcccc
000121 gcaccgcccg ctatctcggc tccccgactc ctgcattccc ccgactctcc cccggccgcc
000181 gccgccgcca tttctgactc tttctccgcg gcgcgtctct cctccgagag cacgccgacc
000241 gcctcccgaa gcggcgtcgc ggccgcggcg gccgccgcct tctcccgccc ctgatggctg
000301 gcgattcccg aaatgaggcg ggttctttct cctttgcctt tttttactgc tcggatgaaa
000361 tttgaatctg tgtatgcttg tggttgtgat gaaatttagc ttgttctgtc cccgcagccg
000421 atgttttgcg aggaagggag cagtgaatcg ggctatgttc tatgtgttat tgattcgctg
000481 aagaagaaaa tcacatcgga ccgctttgtt tacatccagg tgatttgatt tgatttgatt
000541 gtttggagct gcaaatctcg gtcattttct tgtattttct ttatttacca gctgattagt
000601 tttgttcccc gtgatctttt tttccagaaa agggtagagg agaatagcat taagcttagc
000661 ccgattacac tgcactctca caatttgtca aaaaataggc aaactagtac atccaacagt
000721 acagatttag tctcgaattt gctcacaaag aggaaagaag atgccctgtg tgctgtgaat
000781 agtcgtgagt catctcctga tgaaagtgaa ggtgccaatt gccaagatga gtgttcatcg
000841 actgttattg tgggtggaaa tctatccgcg aggaattctg tccgtccgat tagactacca
000901 gaagtggcaa cactccctcc atatacaact tggatatttt tggacaggtg cattttcttg
000961 acatccctaa gatccctgct taaattacat agttatcatg gaaagttata gcgtatacac
001021 tttattatcc attagcaaca acatagcaat actatttcat ttctcttgct aaacagtaaa
001081 cacacgctca tttgtggtct ttagtttttt gtgcaacaat ctattcagtc aaacatagtt
001141 tttccgacct aatgctttat gtctctggtg attttttttc tcttcatgtg taaatgtgta
001201 atggagatat tgcctttcgt tcttactata agcttgggaa atggtatagt ataaaaatgg
001261 aacaagtcct tatgcggccc cttgctacgt gccccacctc tctcttaatc acatgcagtt
001321 gcagacttgc aggctgggag tgtgtgttaa aacaagagca gcaaatgcca cattgactgc
001381 cttgaattca tcttcttggc tttggtagca aagctattgt gccagaacca ttggctttgc
001441 ctgctgcagt gtttcttttg cttttgctgt ttcatccgct ttatgcttct tagtgttctc
001501 tttgctattg cgtgattttg tggagcagca agcaaaaaat cagactgaaa catgtttttg
001561 atgaattgtt tgttgatatg aatttaacag tatatctcat atgacaaact tctatttttc
001621 taaataagta atgcaaaaca tgcatggtca cagttacaat ccagcatact tttagtttgg
001681 agaggtaggg catcttaagg tttgttgaaa tataagattt tacaatcttt cgtgcaggaa
001741 ccagcggatg caagaagacc aatctgtact tggtcgtcga aggatttact atgatacaaa
001801 ctgtggcgaa gctttaattt gcagtgatag tgaagatgaa gctgttgagg acgaggaaga
001861 gaaaaaggag ttcaaggatt ctgaagattg cataattcgg taaatatgct ttggacatgc
001921 atttgttttc ttttgccttg aacattcact aaggatgctc aacttgtttg accgttacag
001981 gctcatggga ccaagataca ggtgcagtta ccatagcacc tggagcttgg gctcagtcca
002041 tagaataaca gatctgatga ctctgtagta atagtttcat ggagaaatgc tttcttctgt
002101 aagcattttg tcatattctc tgtttttctt ttgactggga aaactaccag gactttgcct
002161 agtagtgtaa tttcattaaa gaataaaaaa tagtaatatt ctctttttga agtcacaata
002221 taacatagta cagaagcaat agagaaatga tattaaatat actggtcaag taacatttgg
002281 tatgaaatat tcccaagaga ttatttagta aaactacatt attaaaaact tgtaagaaaa
002341 agggtttggt tttggggcat atgtcttata tcattaaatg aaatggtcat taccagtttt
002401 atctacattg ttccagggga aaaccttgag ctggtcacac tgcatatttg acctggtttt
002461 gttttgtgca acccttgcac aagcaagaaa agtatggtta cagcattaat ctgagttgtt
002521 tgtggattaa tttagacctt aaacatcata gatcacaata atttggtttc tcctgtatgg
002581 aattcttcca cttaagggtg attttgtgca atgattgcca ggatgaccat tcaagaatgt
002641 ggcatgtctg atgctgtgct tgaaactcta gctcgagata tcgaaagggc tcctgatgat
002701 ataaaggttc atacaacatt tattcaatct cacgtcacat ttgcatttga tccatttggg
002761 attttcctct tccaacttat tgtttcattt ctgaaaaatt aaattacgtg tctattttcc
002821 aggccaggta tgagatccta caaggggaga aacctgaggg ttcttccaag aaagtgtctg
002881 aacttaatgt caaaatggaa gacgtgtacg gtgataaaga tctggatgca gcattggatt
002941 cctttgacaa tctcttttgt cgccgatgtt tggtacgttt tctgttaatt gtcatgtgtg
003001 ttttacataa tatctctggt ttactgatga aacattctgc tcattttgat gttggaaggt
003061 ttttgattgc aagctacatg ggtgttctca agatttagta tttccggtaa ttttcaaacc
003121 aatgagttat ttcctaaact tgtgtgttgt tctaattagt gtccttttcg tatagactga
003181 aaagcaggca ccattgtgca gctcggatga gggtacacca tgtggtattc actgttacaa
003241 actggtctgt attttatagg catatgactg tggaaaagca gctcttcttt tatgatgatt
003301 tagatatccg aaacataagc atatgccgtt ttgctgatct ttacctcatt tataatcttt
003361 ttgtcaggtc tctaaaccag atgctatcat ggagattgat tctcatttgc ttgttgatgt
003421 tgaggagcca acatcggaca atctaaagga tcagataggg tcaaataaga aaaagcttgg
003481 ttctagtggg cagaaaacaa aatctcaaca aagtgaaagt tcttcaactg caagggtttc
003541 ctcagaaagc agtgagtctg aagtacaact gttaagcaat aaatccccgc aacactctcc
003601 tggcctctca aaaaataagc ttggcgcaaa aggtggaatc aagaaaagta ctaacagaag
003661 aattgctgag agaattctaa tgagtgtgaa aaaggggcaa caggaaatgt caccggactc
003721 taattctatt gttaatggat gccattggcc tagggatatg aagcttagat ctgatactag
003781 gagtggaatt aaggattctg ttgtatcctc acagtgtaat tctccaagca caaggagttt
003841 tagaaagaag ggcacacttc aaatggagaa taactcatct tttgtggatg ctcagagtga
003901 ttcaatggag gatacaaata atgaacattc agcaacagat ggttgtgata gttcaaggaa
003961 agaggaatgt gttgatgaga gtatatgcag gcaagaagct catggcaggt cctggaaagt
004021 gattgagcaa gggcttctat tgaaaggatt agagattttt ggaaagaaca ggttggtccc
004081 ttgaaatgat cagcttcata tgaattattt cactaccttc tacttcatct taatatttgt
004141 atactattgc acaactaact gctgtatctg ttcaggacag agtaaacgtt aatgtgtcta
004201 atccctccgt cccaaaatat aaggcgtgct ttgactttta attgtcaatt tctcacaagt
004261 atactgtcta tactctatag tggaaccaac atcatatgaa agtacattca aatatgaatc
004321 tgacaatacc atttttatat cactaaacct atatattgtc agactagttg tgagtcaaga
004381 tttgtaaaat ttgaatttta aaatgcgtgc acaccttata ttttggggtg gagggattaa
004441 cctttcagtt cagcacaaga aactgactat gctttctttt aatatatctg tattactaaa
004501 agtattcaac acaaatgtct atatttaaag caaatgctct tgcatcataa ttagacatcc
004561 ccgaaactat attcttatac tactacattt caagtaaaag ctgtaacatg aagatacaat
004621 ctacaatttg tcatgcataa cgtattggaa tgcggaatta actggaattt ctaatgtttg
004681 catcatttag tatctagttg tgttagttat agcgtttcat gtacaagaaa ttctgatgta
004741 tgttcatttc aaatgcctta aaaactcatt cctgttttct ttggatgtct tgcaagcata
004801 ttggaaatgt tctttatcct ttctataatg agtagaatac cttgttttcc ctaatttgaa
004861 tagtcatact gagcccttgt ttttcctatg ttgaagttgt ttaattgctc ggaaccttct
004921 gggtgggatg aaaacatgca cagatgtttt tcagtatatg aattacattg aaaacagcag
004981 tgcatctgga gctcttagtg gtgttgattc tcttgttaaa ggatatatga aggtaggatt
005041 catcataaag ctcatttact tgtattttcc caaggtttca tcttacttta atgcttgaac
005101 tcccagggta atgaattacg gacaagatca agatttgtga gaaggcgagg aagggtccgc
005161 cgtttgaagt acacctggaa aactgcaggc taccatttta taaggaaaag gattacagaa
005221 aggaaggatc agccttgtcg acaatacact ccttgtggtt gccagtctgc atgtgggaag
005281 caatgtccat gtctcacaaa tggtacctgc tgtgagaaat actgtgggtg agctacttca
005341 attattcata ttgcagactc cgagaacatt ttttcttcta gatattaata atgttgctta
005401 tgaaaacaaa actgtgtaga tgtatacaat ttcaatattg tttggttagt gccgaccaat
005461 tatgtcgtat gatcacatct tagttttgca atcattgctg cttactgaaa aggaaaggaa
005521 aataaaacct aggaggaact aggcaccctt tcaattaaga ggaaaacagg caccaaattt
005581 ctagttgaag aggacttgaa ccttgatggt gggagagtga gggtgtaaac tccgcatttc
005641 tcacccaaat ggtgaatcaa acacatgctt ctcttttgtt ctgtgtgctc ttttggctat
005701 tagctattac ttattttgat aatttataat tttaattgga ataaatgatg caaacacatg
005761 gagtgcaaat gtttgctgtc cgcatcctgc tgatgcaagt tgaagtaatc ctttctgcgt
005821 tgcaggtgcc cgaaaatgtg caagaatcgc ttccgaggtt gccattgcgc aaagagtcag
005881 tgtcgcagcc ggcagtgtcc atgctttgct gctgacaggg aatgtgatcc tgatgtgtgt
005941 agaaactgct gggtagggta tgtattttaa attctgatga ccctttgaat gattttgcta
006001 gttaatgcac atttgtatat cttagagaaa ggcaccaact ataatgtgct tttcattctt
006061 tgcacttctc caaccttaca tctaccttga aagttgagaa attaccacct atgcctgcac
006121 ttgaaggatg gaattttgat ggatgatgga tttatcctta agtgcaggaa gaatcttgca
006181 tatgtatatt ccagtatctg aagatacgga gttctgcagt aaaatatctt aatggtagaa
006241 ttgaatttaa ttaatataat catatcaatt gcttgcccaa cagtcccaat aggcaatagc
006301 tacattccac aattaaaaaa atggtgcaat aataataatt tgacatttcc ttctcatacc
006361 atttgctagc atacttgata gtgtgtgcca gcacattgac aattgatatt ctatatctaa
006421 attatttata acaatatctg agttttatag gagtgtttac caggagttaa tccatgaaaa
006481 atgtatcaat gatgggggag tttaatttga atttgttatg aacgagcttc taatggtagg
006541 aaatgaaatt ttagatactg taagttgtta ggcaaacacc aaagatgagt atattatccg
006601 gccagtgtgt aaatccaatc atgatccttt ttcactccat ggaaccttaa atatgctttc
006661 tgttattcat tgttgaaata gtctgttatt caatttcaat tactgtttct tcatccctaa
006721 tttttctaga acaaagcgcc agtacattga acttctattt ttctacctgt actttctatt
006781 gtgcaggtgc ggtgatggta cattgggagt ccctaaccaa agaggtgata attatgaatg
006841 ccggaacatg aaactgctgc ttaaacagca acaaagggta aaccttttgc actttgattt
006901 attcatgcta ttgcaccttg gttataattt cgtcaagcct atcgattttt tatgcctgct
006961 tggcccttcc atttgccttt attcgatgct ttgatatttt tgtgtgagga ggcttgaggt
007021 ctaagttaat tacccagcag tacttctcaa tagttttatt cttttttttt aatatttttc
007081 acgtgagttc aaattccagt tgtctaaata caaaagatct taagtttaat accaaagaaa
007141 ctagttagag taactatatt ccaaaacagg caatgaacta tgaaccaaaa aacttcccat
007201 tagcaggaaa ataattgcat aaagtatcta tcgattatgt tggtgaattt atgaaacacc
007261 agggggtgtt acttcatttt ctattacagg tcctattcca tctctaaata tctgtaaata
007321 gtattgactt gctatgtgca ctcttcaggt cttacttggg agatctgatg tttctggctg
007381 gggagctttc ctcaaggtaa gatttctcta ttgacccttt tcctccctca taggacgtac
007441 cctcatctaa ctagtccttt tcctaaatct tcagaatagt gttgggaagc acgagtatct
007501 tggcgagtac actggggagc ttatctccca taaagaagct gacaagcgtg gaaagatata
007561 tgaccgtgag aattcatcgt tccttttcaa cttgaacaat gaggtgagtg caaagacacc
007621 ccgcaaatta cggtctgcaa gcattcagga ttgcatactg tactgatttg actagcctaa
007681 tgtcatcctt ttgcgtgaac cgagttgttt acatccccaa cccactgttg ttcaatatcg
007741 cgcgatttat gatccgctgc agtgttttcg ctgttttcgc cagtaccgga tgctcactca
007801 ctcactttac cctctcgatg aatgcagtac gttcttgatg cctacagaat gggcgacaag
007861 ctgaagttcg ccaaccattc ccctgatcca aactgctacg ccaaggtcat catggtagca
007921 ggcgatcaca gggtggggat cttcgccaaa gagcggatca gcgcgggcga ggagctgttc
007981 tacgactacc gctacgagcc cgaccgggcc ccggcgtggg ctcgcaagcc cgaggggccc
008041 ggtgccaagg acgacgccca gccttccacc gggagagcaa agaagctcgc ccactgaaga
008101 agaagaagaa gaagaagatc agccgttgat tcttttgttg tcttggttga ttctttcgtt
008161 attggtgagg gggaccgaga actctgacgg tgattagcgc cgtaaggaaa actttcctgc
008221 cattcgttgg ccccctcgat tcgattcgtt gattttccct gaattctgta actgctgcac
008281 ctgtcgccag ttcaacttca aaagattttt ctgattctgg
|
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。