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Update Information

Oryza sativa (japonica cultivar-group) chloroplast genome. (X15901)

General information
/gene	rpoC2
Feature Key	CDS
/protein_id	CAA33988.1
/product	RNA polymerase beta' subunit-2
Location Source	24727..29268 Go to Genome Maps
Length	4,542(bp) , 1,513(aa)

DB Reference
GI		11973
GOA		P12093
UniProt		P12093

Nucleotide 0001 atggcggaac gggccaatct ggtctttcag aataaagaga tagatggaac tgctatgaaa 0061 cgacttatta gcagattaat agatcatttc ggaatgggat atacatccca tatactggat 0121 caaataaaaa cgctgggctt ccatcaagcc actactacat cgatttcatt aggaatcgag 0181 gatcttttaa caataccctc taagggatgg ttagtccaag atgcggaaca acagagtttt 0241 cttttggaaa aacactatta ttatggggct gtacacgcgg tagaaaaatt acgccaatcc 0301 gttgaaatct ggtatgctac aagtgaatat ttgaaacacg aaatgaattc gaattttcgg 0361 ataacagatc cttctaatcc agtctatcta atgtcttttt caggagctag aggaaatgca 0421 tcgcaggtac accaattagt aggtatgcga ggattaatgg cggatcctca aggacaaatg 0481 attgatttac ctattcaaag caatttacgc gagggacttt ctttgacaga atatataatt 0541 tcctgctacg gagcccgcaa aggggttgta gatactgctg tacgaacggc ggatgctgga 0601 tatcttacac gtagacttgt tgaagtagtt caacatatta ttgtgcgtag aagagattgt 0661 ggtactatcc aagctatttc tgtgagtcct caaaatggga tgacggaaaa actttttgta 0721 caaacattaa ttggtcgtgt attagcaaac gatatatata tcggttcacg gtgcattgcc 0781 actcgaaatc aagatattgg aattgggtta gtcaatcgat tcataaccac ctttcgagca 0841 cagccatttc gagcacaacc aatatatatt agaaccccct ttacttgccg gagcacatct 0901 tggatctgtc aattatgtta tggtcggagt tccactcatg gcgatctggt cgaattgggg 0961 gaagctgtag gtgttattgc gggtcaatct attggggagc cagggactca actaacatta 1021 agaacttttc atactggtgg ggtattcaca gggggtactg ccgaccttgt acgatcccct 1081 tcaaatggaa aaatccaatt caatggggat ttggttcacc ccacacgtac ccgtcatggg 1141 cagcctgctt ttctatgtta tatagacttg catataacta ttcagagtca ggatattcta 1201 catagtgtga ctattccttc aaaaagcttg attctagtgc aaaatgatca atatgtagaa 1261 tccgaacaag taattgcgga gattcgtgcc ggaacgtccg ctttgcattt taaagaaaag 1321 gtacaaaaac atatttattc cgaatcagat ggggaaatgc actggagtac cgatgtttat 1381 catgcgcccg aatatcaata tggtaatctt cgtcgattac caaaaacaag ccatttatgg 1441 atattgtcag taagtatgtg cagatctagt atagcttctt tttcgctcca caaggatcaa 1501 gatcaaatga atacttattc cttttctgtt gacggaaggt atatctttgg cctctcgatg 1561 gctgatgatg aggtaagaca tagactgttg gatacttttg gtaaaaaaga tagggaaatt 1621 cttgattatt caacgccgga tcgaatcatg tccaatggtc attggaattt tgtctatcct 1681 tctattcttc aaaataattt tgatttgtta gcgaaaaagc gaagaaatag gttcgccatt 1741 ccattacagt atcatcaaga acaagagaaa gaaccaatat cctgttttgg gatttcgatt 1801 gaaataccct ttatgggtgt tttacgtaga aatactatag ttgcttattt tgacgaccca 1861 cgatacaaaa aagataaaaa gggttcagga attgttaaat ttagatatag gaccctagag 1921 gacgaatata ggactcgaga gaaagactca gagaacgaat acgggagccc agaaaacgaa 1981 tataggaccc gagaggaaga atgtaaaacc ctagaagacg aatataggac tcgagaggag 2041 gagtatgaaa ccctagaaga tgaatatggg atcccagaga acgaatatga aaccctagaa 2101 gatgaatatg gaatcctaga ggacgaatat aggactcgag aggaggaatc cgaggacgaa 2161 tatgggagtc cagagaacaa atataggccc cgagaggata aatatggcac tttagaggaa 2221 gactcagagg acgaacatgg gactttagag gaagactcag aggaagactc agaggacgaa 2281 tatgggaacc cggaggaaga ttccgtctta aaaaaggggg ttttgattga gcatcgagga 2341 acaaaagaat ttagtctaaa ataccaaaaa gaagtagatc ggtttttttt cattctccaa 2401 gaactgcata tcttgccgag atcctcatcc ctaaaggtac ttgacaatag tattattgga 2461 gtggatacac aactcacaaa aaatacaaga agtcggctgg gtggattggt tcgagtgaag 2521 agaaaaaaaa gccatacgga actaaaaatc ttttctggag atattcattt tcctgaagag 2581 gcggataaga tattaggtgg cagtttgata ccactagaaa gagaaaaaaa agattcgaag 2641 gaatcaaaaa aaagggaaaa ttgggtctat gttcagtgga aaaaaattct caagagcaag 2701 gaaaagtatt ttgttttggt tcgacctgca gtcgcgtatg aaatgaacga agggagaaat 2761 ttagcaacac ttttcccaca ggatctcttc gaggaagagg gtaatctcca acttcgactt 2821 gtcaatttta tttctcatga aaatagcaag ttaactcaaa gaatttatca tacgaatagt 2881 caattcgttc gaacttgctt agtattgaat tgggaacaag aagaaaaaga ggaggctcgt 2941 gcttcccttg ttgagataag agcaaatggt ctgattcgcg atttcctaag aattgggtta 3001 atcaaatcca ctatttcgta tacacgaaaa aggtatgata gcagaagtgc aggactgatt 3061 ctccataata ggttagatcg caccaatacc aattcctttt attccaaggc gaagattcaa 3121 tcacttagcc aacatcaaga agctattggt accttgttga atcgaaataa agaataccaa 3181 tctttgatgg ttttgtcggc atccaactgt tctcgaattg gtttttttaa gaattcaaaa 3241 aatcccaatg gggtaaaaga atcgaatcct agaattccta ttccaaaatt ttgggggctc 3301 tttcgaaatt tttcgggact cttaggtact attgcaccta gtatatcgaa tttttcttca 3361 tcttactatt tactaacgta taatcagatc ctgttaaaaa agcatttgct ccttgacaat 3421 ttgaaacaaa acttcaaagt acttcaagga cttaaacact ctttaataaa tgaaaatcaa 3481 aggacttcaa atttcgatag taacatcatg ttggatccat tccagttaaa ttggcacttt 3541 ctccctcatg attcttggga agagacatca gcaaaaattc accttggaca atttatttgc 3601 gaaaatgtat gtctatttaa atcgcacata aaaaaatcag gtcaaatttt cattgtaaat 3661 atagattcct ttgttataag agcagctaag ccttatttgg ccactacagg agcaactgtt 3721 catggtcatt atggagaaat cctttacaaa ggggataggt tagttacgtt tatatacgaa 3781 aaagcgagat ctagtgacat aacgcaaggt cttccaaaag tagaacaaat cttcgaagcg 3841 cgttcaattg attcactatc gccgaatctc gaaaggagaa ttgaggattg gaatgagcgt 3901 ataccaagaa ttcttggggg tccttgggga ttcttgattg gagctgagtt aaccatagcc 3961 caaagtcgta tctctttggt taataagatc caaaaggttt atcgatccca aggggtacag 4021 atccataata gacatataga gattattata cgccaagtaa catcaaaagt gcgggtttcc 4081 gaagatggaa tgtctaatgt tttttcacct ggggaattaa ttggactatt gcgagcagag 4141 cgagcagggc gggctttgga tgaatcgatc tattatcggg caatcttatt gggaataaca 4201 agggtttccc tgaataccca aagtttcata tctgaagcaa gttttcaaga aactgctcga 4261 gttttagcaa aagctgcctt acgaggtcgt attgattggt tgaaaggcct gaaagaaaac 4321 gtagttctgg gggggattat acctgttggt accggattcc aaaaatttgt gcaccgttac 4381 ccacaaaaca agaaccttta tttcgaaatt caaaaaaaaa aactatttgc gtcggaaatg 4441 agagatattt tgtttctcca tacagaatta gtttcttctg attctgacgt aacaaacaat 4501 ttctatgaga catcagaatc accatttacc ccatttatat ga

Amino acid 0001 MAERANLVFQ NKEIDGTAMK RLISRLIDHF GMGYTSHILD QIKTLGFHQA TTTSISLGIE 0061 DLLTIPSKGW LVQDAEQQSF LLEKHYYYGA VHAVEKLRQS VEIWYATSEY LKHEMNSNFR 0121 ITDPSNPVYL MSFSGARGNA SQVHQLVGMR GLMADPQGQM IDLPIQSNLR EGLSLTEYII 0181 SCYGARKGVV DTAVRTADAG YLTRRLVEVV QHIIVRRRDC GTIQAISVSP QNGMTEKLFV 0241 QTLIGRVLAN DIYIGSRCIA TRNQDIGIGL VNRFITTFRA QPFRAQPIYI RTPFTCRSTS 0301 WICQLCYGRS STHGDLVELG EAVGVIAGQS IGEPGTQLTL RTFHTGGVFT GGTADLVRSP 0361 SNGKIQFNGD LVHPTRTRHG QPAFLCYIDL HITIQSQDIL HSVTIPSKSL ILVQNDQYVE 0421 SEQVIAEIRA GTSALHFKEK VQKHIYSESD GEMHWSTDVY HAPEYQYGNL RRLPKTSHLW 0481 ILSVSMCRSS IASFSLHKDQ DQMNTYSFSV DGRYIFGLSM ADDEVRHRLL DTFGKKDREI 0541 LDYSTPDRIM SNGHWNFVYP SILQNNFDLL AKKRRNRFAI PLQYHQEQEK EPISCFGISI 0601 EIPFMGVLRR NTIVAYFDDP RYKKDKKGSG IVKFRYRTLE DEYRTREKDS ENEYGSPENE 0661 YRTREEECKT LEDEYRTREE EYETLEDEYG IPENEYETLE DEYGILEDEY RTREEESEDE 0721 YGSPENKYRP REDKYGTLEE DSEDEHGTLE EDSEEDSEDE YGNPEEDSVL KKGVLIEHRG 0781 TKEFSLKYQK EVDRFFFILQ ELHILPRSSS LKVLDNSIIG VDTQLTKNTR SRLGGLVRVK 0841 RKKSHTELKI FSGDIHFPEE ADKILGGSLI PLEREKKDSK ESKKRENWVY VQWKKILKSK 0901 EKYFVLVRPA VAYEMNEGRN LATLFPQDLF EEEGNLQLRL VNFISHENSK LTQRIYHTNS 0961 QFVRTCLVLN WEQEEKEEAR ASLVEIRANG LIRDFLRIGL IKSTISYTRK RYDSRSAGLI 1021 LHNRLDRTNT NSFYSKAKIQ SLSQHQEAIG TLLNRNKEYQ SLMVLSASNC SRIGFFKNSK 1081 NPNGVKESNP RIPIPKFWGL FRNFSGLLGT IAPSISNFSS SYYLLTYNQI LLKKHLLLDN 1141 LKQNFKVLQG LKHSLINENQ RTSNFDSNIM LDPFQLNWHF LPHDSWEETS AKIHLGQFIC 1201 ENVCLFKSHI KKSGQIFIVN IDSFVIRAAK PYLATTGATV HGHYGEILYK GDRLVTFIYE 1261 KARSSDITQG LPKVEQIFEA RSIDSLSPNL ERRIEDWNER IPRILGGPWG FLIGAELTIA 1321 QSRISLVNKI QKVYRSQGVQ IHNRHIEIII RQVTSKVRVS EDGMSNVFSP GELIGLLRAE 1381 RAGRALDESI YYRAILLGIT RVSLNTQSFI SEASFQETAR VLAKAALRGR IDWLKGLKEN 1441 VVLGGIIPVG TGFQKFVHRY PQNKNLYFEI QKKKLFASEM RDILFLHTEL VSSDSDVTNN 1501 FYETSESPFT PFI

National Institute of Genetics