NBRP Medaka

Medaka Strain
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Home > cDNA/BAC/Fosmid search > cDNA cluster detail

CLSTR00087 VD

Merge cluster information
Name	CLSTR00087
Library	ALL	174	cDNA [Download: FASTA]
	olea	1	cDNA [Download: FASTA] rolea17g03
	oleb	1	cDNA [Download: FASTA] roleb44l21
	olec	0 cDNA
	olvl	139	cDNA [Download: FASTA] rolvl10f15 rolvl10g10 rolvl10j17 rolvl11b11 rolvl11d17 rolvl11k14 rolvl12b11 rolvl12d04 rolvl13j18 rolvl14f09 rolvl14f22 rolvl15a15 rolvl15n17 rolvl16c09 rolvl16k05 rolvl17d19 rolvl17l18 rolvl17m16 rolvl17m21 rolvl18d15 rolvl18e11 rolvl18l18 rolvl19c06 rolvl19c10 rolvl19c12 rolvl19g17 rolvl1i02 rolvl20b04 rolvl20b17 rolvl20k20 rolvl22b20 rolvl22e17 rolvl23a24 rolvl23e04 rolvl23h07 rolvl23m06 rolvl24i02 rolvl25j01 rolvl25m03 rolvl26e20 rolvl26n13 rolvl27d13 rolvl28d13 rolvl29c20 rolvl29e02 rolvl2a18 rolvl2b19 rolvl2i05 rolvl2m02 rolvl2p24 rolvl30b22 rolvl30c20 rolvl31i22 rolvl31l23 rolvl31p15 rolvl32c18 rolvl32n06 rolvl33c10 rolvl33l09 rolvl34o15 rolvl35f14 rolvl36a16 rolvl36d04 rolvl36f21 rolvl36n23 rolvl36p04 rolvl37a08 rolvl37j22 rolvl37k12 rolvl38a08 rolvl38f04 rolvl38g02 rolvl39f01 rolvl39g16 rolvl3g05 rolvl40d16 rolvl40p06 rolvl41a17 rolvl41h07 rolvl42a12 rolvl42e02 rolvl43i17 rolvl43k03 rolvl44c10 rolvl44j02 rolvl44p07 rolvl45a19 rolvl45c24 rolvl45p07 rolvl45p17 rolvl46i06 rolvl47f19 rolvl47h11 rolvl47p22 rolvl48e07 rolvl48i07 rolvl49i05 rolvl4e01 rolvl4h19 rolvl4k14 rolvl4k18 rolvl51c13 rolvl51k24 rolvl51m22 rolvl52d02 rolvl52d06 rolvl53d02 rolvl53l05 rolvl55j02 rolvl56f09 rolvl57j11 rolvl57j19 rolvl57m10 rolvl58b13 rolvl58e24 rolvl58l09 rolvl58m10 rolvl58n24 rolvl59i03 rolvl59m10 rolvl5a08 rolvl5e01 rolvl60c06 rolvl61d13 rolvl61l11 rolvl62a16 rolvl62c21 rolvl62p12 rolvl63j09 rolvl63p18 rolvl64a17 rolvl64a24 rolvl64h22 rolvl64o04 rolvl65g08 rolvl6f04 rolvl8c19 rolvl8j17 rolvl9f15
	olli	33	cDNA [Download: FASTA] rolli10a20 rolli10g07 rolli10j03 rolli11d08 rolli12k12 rolli13b22 rolli19g18 rolli21b19 rolli23o21 rolli25m10 rolli28n15 rolli2b23 rolli30k20 rolli31m03 rolli35h22 rolli41i22 rolli42b11 rolli43l23 rolli44h16 rolli4c07 rolli4g17 rolli4m24 rolli51c11 rolli54m10 rolli55i02 rolli56m13 rolli62f14 rolli62m06 rolli63c08 rolli65i24 rolli8d01 rolli8m21 rolli9g13
	olbr	0 cDNA
	olgi	0 cDNA
	olki	0 cDNA
	olsp	0 cDNA
	olte	0 cDNA
	olova	0 cDNA

Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/

Contig information - 1
Name	Contig1
Clone count	1 clones
Length	962
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	416
Evalue	9.81505e-39
Detail
Sequence	[Download: FASTA] >Contig1 ACTTATTACACTTTTGCTTGTTTTTTTATTTCATTACAAACTATTCTTGCTGATAAAAGTTGAAA CAATCCTCCTAAGACTGGTTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACAGAAGTCAGC CACTCTGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACACTCGGCGAGTTTCCTGTGGT CGTCATGGGCGGCTTTGTGCTGCTCAACGTCCCGATGTGACCCTTCTTCCTTGTAGCTGAGCAGG TATCGAAATCTTGAGGACTTGTAGACCAGCAGCAAACAATCAGAGCAGCTTTCATAGAAGTCCAC AGCTCCGGTGTCATTGTACTCCACAGGCTGTCTGCCCTTCTCTAGTCGGATGTTGTCAGCATGCA GGGTTTGGAGCTCGGTCTCAATATTAGATGGTACGGTCATATGGATGAAGTAAGTAGTGCAGGAA GAAAGGTTGTGATTGAACATGTTCCTCTCGATGTACGAGAAGGTTTTGTTGTCTGGAAGGAGTTT AAACTCCACGTGTGAGCTGGAGACATTTGGCAACATATCTATAGCTTCTTCACGGTCGGACACGC CCCAGACCAGAACCCAGTTACTGAAAATCTGCATGAAGCAAAGGCGTGTTTGAATCAGCGGCTGA AAACATGTCAGAATTTAACAATGAAATAAAAAACACAAACGTTTGAAACGTTTGTGGAGCAAATG AAGGGAAATGTTGCACATGAGAGCACGACTTTTAGGGGTCACTACAGTCGATCATCTGCCTCCGT CTATCCCTATCCTCCTCAGTCAAACCTCCACCTCTAGATGTTTCCTCCACCTGCTCACCACCCAC AGCGAGACACAAGAATTAAAGAAGATGAGCTTTTCAAACATCTCCTTCCATCTTTTCTTCATACT TGCANAGCCTGTCAACACGTCTCCATAACCTGCTGATTCATCATGCAGTCAA

Contig information - 2
Name	Contig2
Clone count	2 clones
Length	881
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	445
Evalue	3.67369e-42
Detail
Sequence	[Download: FASTA] >Contig2 AAACGCTCATTACACTTTTCTGCTTTTTTAAATTTCATTACAAACGATTCTTGCTGATAAAAGTT GAAACGTTCCTCCTAAGACTGATTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACAGAAGT CTGGGTTGATAGAAGAAAACAAACAAACAATTAGTTGTTTTTGAAAACAACAAATGCCTTTACTG TCCTTTCTTCCAGTACTGTGCCCCGGTTGTTCGGTTGTCCTCTCGGTGTTGTGGTTGACACTCAC CAGCCACTCCGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACATTCGGCGAGTTTCTTG TAGTCGTCATGGGCGGCTTTGTGCTGCTCAACATCCCGATGTGACCCTTCTTCCTTGTAGCTGAG CAGGTATCGAAATTTTGAGCACTTGTAGACCAGCAGCAAACAATCAGAGCAGGGCTCATAGAAGT CCACAGCTCCGGTGTCATTGTACTCCACAGGCTGTCCGTCCTCCTCCACTCGGATGTTGTCAGCA TGCAGGGTTTGGAGCTCGGTCTCATTATTAGACGGTACGGTCATATGGATGAAGTAAGTAGTGCA GGAAGAAAGGTTGTGACGGTACACGTTCCTCTCGTTGTACGTGAAGGTTTTGTTGTCTGGAAGGA GTTTAAACTCCACGTGGGAGCTGGAGGCATTTCCCAGCACATGATCACCCTCTTCATGGTCGGAC ACGCCCCAGACCAGAACCCAGTTCCTGAAAATCTTGTTCAGGTCTTTTGTCGGCAGCCTTTTGGC CAAACCGTCACACTCGGAGGCGTTGGGAGCTGCATGTGAGCCGATTACTGCCAGCAGCAGCAGCA CTGAGATCTTTTCTGCACTCATCTTTATCAGACACC

Contig information - 3
Name	Contig3
Clone count	2 clones
Length	738
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	473
Evalue	1.48961e-45
Detail
Sequence	[Download: FASTA] >Contig3 ACTTTTCTGCTTTTTTAAATTTCATTACAAACTATTCTTGCTGATAAAAGTTGAAACGTTCCTCC TAAGACTGATTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACAGAAGTCAGCCACTCCGTC ATAGACGTACGGCTTCTTTTTAGGGAACCTCAGACACTCTGTGAGTTTCCTGTGGTCGTCATGGG CGGCTTTGTGCTGCTCAACGTCCCGATGTGAACCTTCTTCCTTGTAGCTGAGCAGGTATCGAACT CTTGAGCACTTGTAAACCAGCAACAAACAATCAGAGCAGCTCTCATAGAAGTCCACAGCTCCGGT GTCATTGTACTCCACAGGCTGTCCGTCCTCCTCCACTCGGATGTTGACTGCATGCAGGGTTTGGA GCTCGGTCTCATTGTTAGAAGGTACGGTCACATTGATGAAGCTCGTAGTGCAGGAAGAAAGGTTG TGATGGAATATGGTCCTCTCGATGTACGAGAAGGTTTTATTGTCTGGAAGGAGTTTAAACTCCAC GTGTGAGCTGGACACATTTGGCAAGAAAGCTTCAACTGCTTCATGGTCGGACACGCCCCAGACCA GAACCCAGTTCCTGAAAATCTTGTTCAGGTCTTTTGTCGGCAGCCTTTTGGCCAAACCGTCACAC TCTGAGGCGTTTGGAGCTGCATGTGAGCCGATCACTGCCAGCAGCAGCAGCACTGAGATCTTCTC TGCACTCATCTTTATCAGACACC

Contig information - 4
Name	Contig4
Clone count	2 clones
Length	869
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	452
Evalue	5.5242e-43
Detail
Sequence	[Download: FASTA] >Contig4 GACCAAAACGCTCATTACACTTTTCTGCTTTTTTAAATTTCATTACAAACGATTCTTGCTGATAA AAGTTGAAACGTTCCTCCTAAGACTGATTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACA GAAGTCAGCCACTCCGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACATTCGGCGAGTT TCTTGTAGTCGTCATGGGCGGCTTTGTGCTGCTCAACATCCCGATGTGACCCTTCTTCCTCTGAC ACACAGCATATGAGAGTGAGATCAAACAGTCAAACCAAAAGTCTGTTTTCAGTGTGAACATGGGT TTTACTGTAGCTGAGCAGGTATCGAAATTTTGAGCACTTGTAGACCAGCAGCAAACAATCAGAGC AGGGCTCATAGAAGTCCACAGCTCCGGTGTCATTGTACTCCACAGGCTGTCCGTCCTCCTCCACT CGGATGTTGTCAGCATGCAGGGTTTGGAGCTCGGTCTCATTATTAGACGGTACGGTCATATGGAT GAAGTAAGTAGTGCAGGAAGAAAGGTTGTGACGGTACACGTTCCTCTCGTTGTACGTGAAGGTTT TGTTGTCTGGAAGGAGTTTAAACTCCACGTGGGAGCTGGAGGCATTTCCCAGCACATGATCACCC TCTTCATGGTCGGACACGCCCCAGACCAGAACCCAGTTCCTGAAAATCTTGTTCAGGTCTTTTGT CGGCAGCCTTTTGGCCAAACCGTCACACTCGGAGGCGTTGGGAGCTGCATGTGAGCCGATTACTG CCAGCAGCAGCAGCACTGAGATCTTTTCTGCACTCATCTTTATCAGACACAGAAACTCTGCTGCA CTGACAGGAGCTTTTAAAACCTGT

Contig information - 5
Name	Contig5
Clone count	2 clones
Length	901
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	370
Evalue	1.87615e-33
Detail
Sequence	[Download: FASTA] >Contig5 ACCAAACGCTCATTACACTTTTCTGCTTTTTTAAATTTCATTACAAACGATTCTTGCTGATAAAA GTTGAAACGTTCCTCCTAAGACTGATTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACAGA AGTCAGCCACTCCGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACATTCGGCGAGTTTC TTGTAGTCGTCATGGGCGGCTTTGTGCTGCTCAACATCCCGATGTGACCCTTCTTCCTCTGACAC ACAGCATATGAGAGTGAGATCAAACAGTCAAACCAAAAGTCTGTTTTCAGTGTGAACATGGGTTT TACTGTAGCTGAGCAGGTATCGAAATTTTGAGCACTTGTAGACCAGCAGCAAACAATCAGAGCAG GGCTCATAGAAGTCCACAGCTCCGGTGTCATTGTACTCCACAGGCTTTCCGTCCACCTCCACTCG GATGTTGTCAGCATGCAGGGTTTGGAGCTCGGTCTCATTATTAGACGGTACGGTCATATGGATGA AGTAAGTAGTGCAGGAAGAAAGGTTGTGACGGTACACGTTCCTCTCGTTGTACGTGAAGGTTTTG TTGTCTGGAAGGAGTTTAAACTCCACGTGGGAGCTGGAGGCATTTCCCAGCACATGATCACCCTC TTCATGGTCGGACACGCCCCAGACCAGAACCCAGTTCCTGAAAATCTGCATGAAGCAAAGGCGTG TTTGAATCAGCGGCTGATCACATGTAAGAATCTAACAATGAAATAAAAAACACAAATGTTTGAAA TGTTTGTGGAGCAAATGAAGGAAAATGTTGGACATCAGAGCACGACTTTTAGGGGTCACTACAGT CGATCATCTGCCTCCGTCTATCCCTATCCTCCTCAGTCAAACCTCCACCTCTAGAT

Contig information - 6
Name	Contig6
Clone count	3 clones
Length	964
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	307
Evalue	1.6603e-30
Detail
Sequence	[Download: FASTA] >Contig6 ACTTTTCATTACACTTTTCTGCTTTTTAAAATTTTATTACAAACGCTTCTTAATGATAAAAGTTA AAACGTTCCTCCTAACAATGATTATCAGGGTTTGCTTCTGGAGCAGATTTCTTGTGACAGAAGTC TGGGTTGATAGAAGAAAACAAACAAACATTAGTTATTTTTGACAACAACAAATGCCTTTACTGTC CTTTCTTCCAGTACTGTGCCCCAATTGTTCAGTTGTCCTCTCCGTGTTGTGGTTGACACTCACCA GCCACTCTGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACATTCAGCGACTTTCTTGTG GTCGTCATGGGCGGCTTTGTGCTGCTCAACGTCCTGATGTGACCCTTCTTACTCTGACTCACAGG ATATGAGAGTGAGATCAAACAGTCAAACCGGATGTGTGTTTTCAGTGTGAACATGGGTTTTACTG TAGCTGAGCACGAATCGAAATCTTGAGCACTTGTAAACCAGCAACAAACAATCAGAGCAGGGCTC ATAGAAGTCCACAGCTCCGGTGTCATTGTACTCCACAGGCTGTCCGTCCTCCTCCACTCGGATGT TGACAGCATGCAGGGTTTGGAGCTCGGTGTCATTATTAGATGTTACGGTCACATTGATGAAGCTC GTAGTGCAGGAAGAAAGGTTGTGATGGAATATGGTCCTCTTGATGTACGAGAAGGTTTTGTTGTC TGGAAGGGGTTTAAACTCCACGTGTGAGCTGGAGACATTTGGCATCAAAGCTTCAACTGCTTCAT GGTCGGACACGCCCCAGACCAGAACCCAGTTCCTGAAAATCTTGTCTCGCCTTGTTCAGGTCTTT TGTCGGCAGCCTTTTGGTCAAACCGTCACACTCGGAGGCGTTGGGAGCTGCATGTGAGCCGATCA CTGCCAGCAGCAGCAGCACTGAGATCTTCTCTGCACTCATCTTTATCAGACCCA

Contig information - 7
Name	Contig7
Clone count	54 clones
Length	761
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	491
Evalue	1.30562e-47
Detail
Sequence	[Download: FASTA] >Contig7 GACCAAAACGCTCATTACACTTTTCTGCTTTTTTAAATTTCATTACAAACGATTCTTGCTGATAA AAGTTGAAACGTTCCTCCTAAGACTGATTATCAGGGTTTGCTTCTGGAGCGGATTTCTTGTGACA GAAGTCAGCCACTCCGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACATTCGGCGAGTT TCTTGTAGTCGTCATGGGCGGCTTTGTGCTGCTCAACATCCCGATGTGACCCTTCTTCCTTGTAG CTGAGCAGGTATCGAAATTTTGAGCACTTGTAGACCAGCAGCAAACAATCAGAGCAGGGCTCATA GAAGTCCACAGCTCCGGTGTCATTGTACTCCACAGGCTGTCCGTCCTCCTCCACTCGGATGTTGT CAGCATGCAGGGTTTGGAGCTCGGTCTCATTATTAGACGGTACGGTCATATGGATGAAGTAAGTA GTGCAGGAAGAAAGGTTGTGACGGTACACGTTCCTCTCGTTGTACGTGAAGGTTTTGTTGTCTGG AAGGAGTTTAAACTCCACGTGGGAGCTGGAGGCATTTCCCAGCACATGATCACCCTCTTCATGGT CGGACACGCCCCAGACCAGAACCCAGTTCCTGAAAATCTTGTTCAGGTCTTTTGTCGGCAGCCTT TTGGCCAAACCGTCACACTCGGAGGCGTTGGGAGCTGCATGTGAGCCGATTACTGCCAGCAGCAG CAGCACTGAGATCTTTTCTGCACTCATCTTTATCAGACACAGCGAC

Contig information - 8
Name	Contig8
Clone count	60 clones
Length	823
Assemble Result	Assemble Viewer
Homology(BLAST)
Top Hit	tributyltin binding protein type 2 [Paralichthys olivaceus]
Score	495
Evalue	5.21008e-48
Detail
Sequence	[Download: FASTA] >Contig8 GATCAAACACTTATTACACTTTTTTGCTTGGTTTTTTTATTTCATTACAAACTATTCTTGCTGAT AAAAGTTGAAACAATCCTCCTAAGACTGGTTATCAGGGCTTTGCTTCTGGAGCGGATTTCTTGTG ACAGAAGTCAGCCACTCTGTCATAGACGTACGGCTTCTTTTTAGGGAACCCCAGACACTCGGCGA GTTTCCTGTGGTCGTCATGGGCGGCTTTGTGCTGCTCAACGTCCCGATGTGACCCTTCTTCCTTG TAGCTGAGCAGGTATCGAAATCTTGAGGACTTGTAGACCAGCAGCAAACAATCAGAGCAGCTTTC ATAGAAGTCCACAGCTCCGGTGTCATTGTACTCCACAGGCTGTCTGCCCTTCTCTAGTCGGATGT TGTCAGCATGCAGGGTTTGGAGCTCGGTCTCAATATTAGATGGTACGGTCATATGGATGAAGTAA GTAGTGCAGGAAGAAAGGTTGTGATTGAACATGTTCCTCTCGATGTACGAGAAGGTTTTGTTGTC TGGAAGGAGTTTAAACTCCACGTGTGAGCTGGAGACATTTGGCAACATATCTATAGCTTCTTCAC GGTCGGACACGCCCCAGACCAGAACCCAGTTACTGAAAATCTTGTTCAGGTCTTTTGTCGGCAGC CTTTTGGTCAAACCGTCACACTCTGAGGCGTTTGGAGCTGCATGTGAGCCGATCACTGCCAGCAG CAGCAGCACTGAGATCTTCTCTGCACTCATCTTTATCAGACACAGAAACTCTGCCGCACTGACAG GAGCTTTTAAAACCTGTAATGGGGTCAACTCAAACTTTTTGTC

/medaka