Strains

cDNA/BAC/Fosmid

Plasmid for Knock-in Experiments

Information

Medaka Tools

Medaka Strain
in Publications

References
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Related documents

Biological experiments for elementary, junior high and high school students (Japanese)
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Featured Link

From spawning to hatching of medaka ~nibb×niconico 
A checklist of the parasites of medaka 
medaka SNP(Beta)
Official Endocrine Disruption Website
M-marker 2009
Ensembl Medaka
M-Base
NBRP Medaka Genome Project
MEPD
Genomicus - Synteny browser -
ZFIN
ZIRC
UTGB Medaka
UCSC In-Silico PCR
The Fish Biology Journal of Medaka (Vol.1 - Vol.3)
The Fish Biology Journal of Medaka (Vol.4 - Vol.11)
Introduction to Medaka (NBRP Online Forum 2020)

CLSTR06342     VD

Merge cluster information
Name CLSTR06342
Library ALL 166 cDNA [Download: FASTA]
olea 0 cDNA
oleb 43 cDNA [Download: FASTA]
roleb10p19  roleb11a14  roleb11j13  roleb11k12  roleb12p16  roleb13d15  roleb13p10  roleb14k15  roleb16a23  roleb16h01  roleb18j21  roleb18n10  roleb19g09  roleb21o07  roleb27d09  roleb34d10  roleb34g12  roleb36h18  roleb38g06  roleb39b06  roleb39k14  roleb42k15  roleb45o08  roleb46h02  roleb47m11  roleb48a24  roleb48h23  roleb49k11  roleb52b13  roleb52m10  roleb52o06  roleb53g15  roleb55h23  roleb57d21  roleb57g23  roleb57l05  roleb5f05  roleb61a06  roleb62l17  roleb64i06  roleb65d14  roleb6g06  roleb7a13 
olec 87 cDNA [Download: FASTA]
rolec11e18  rolec11e22  rolec11h15  rolec12l05  rolec16j22  rolec16k20  rolec19a20  rolec19n05  rolec1a24  rolec1d04  rolec20n08  rolec21a21  rolec21l01  rolec23b01  rolec23f03  rolec23g07  rolec24e24  rolec24g10  rolec25h08  rolec26d16  rolec26m14  rolec27e19  rolec28d07  rolec28k20  rolec28l22  rolec29a20  rolec29c07  rolec29j11  rolec2c04  rolec2o19  rolec30g09  rolec30l13  rolec32b12  rolec32l04  rolec32l10  rolec33l11  rolec34i16  rolec35l13  rolec36h10  rolec36p06  rolec37o15  rolec38c05  rolec39e03  rolec40d01  rolec41c16  rolec42d10  rolec44a14  rolec44c23  rolec44n20  rolec45g08  rolec47j03  rolec47m10  rolec49a08  rolec49c12  rolec4e21  rolec50f03  rolec50g14  rolec51d12  rolec51e12  rolec52b18  rolec52l17  rolec52p03  rolec54g06  rolec54m03  rolec55h22  rolec55m15  rolec56h06  rolec57i03  rolec58a04  rolec59k08  rolec5h20  rolec5l03  rolec60c20  rolec60j13  rolec60l10  rolec60p11  rolec61b06  rolec61b09  rolec61e04  rolec61i22  rolec63k05  rolec63n03  rolec64e11  rolec65h09  rolec6i04  rolec7g03  rolec8a14 
olvl 0 cDNA
olli 0 cDNA
olbr 2 cDNA [Download: FASTA]
rolbr28c06  rolbr9b10 
olgi 27 cDNA [Download: FASTA]
rolgi10b14  rolgi12g17  rolgi13a02  rolgi14n24  rolgi15e08  rolgi19e12  rolgi1n08  rolgi22o10  rolgi25j19  rolgi28d15  rolgi29i09  rolgi2i15  rolgi33h18  rolgi33i01  rolgi35b01  rolgi35g01  rolgi43h06  rolgi43h24  rolgi44o06  rolgi44p09  rolgi4f02  rolgi4j07  rolgi54o03  rolgi55a08  rolgi65c11  rolgi6o07  rolgi9p15 
olki 7 cDNA [Download: FASTA]
rolki23i09  rolki33a06  rolki42n12  rolki57j20  rolki5j03  rolki64i20  rolki9h20 
olsp 0 cDNA
olte 0 cDNA
olova 0 cDNA

Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/


Contig information - 1
Name Contig1
Clone count 2 clones
Length 659
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit nuclease diphosphate kinase B [Gillichthys mirabilis]
Score 729
Evalue 2.44116e-75
Detail
Sequence [Download: FASTA]
>Contig1
TTGATCAGTGTTTGCTCCGATTGATCGATGAAGAACAGGTGGGAGGGGCTCCAGCTGTCTCAGCT
CCCTGATTGGCTCTTTACTCGTACAGGTAGGGCTGGAAGCAGGAGGTATAGTTGACAAACTCCTC
AGGTTTGAACCACAGGCCAACCTCCTTCTTGGCGTTCTCCAGGGTGTCGCTGCCGTGGATGATGT
TCCTGCCGATGTTGATGCACAGGTCGCCGCGGATGCTGCCGGGCTTGGAGTCGGCCGGGTTGGTC
TCTCCCAGCATCATCCTGACCAGCTTCACGATGTTCTGACCCTCCCAAACCATGGCAAAGACGGG
TCCAGAGGACATGTATTTGCAGAGTCCGCCATAGAAGGGCATGTCCTTCAGGTCCAGGTAGTGCT
GCTTCATGTGATCCTCAGAGGCCTGCAGGAATTTAGCGGCGACCAGGTGGAAGCCTCTCTGCTCC
AGACGCTTGATGATCTCGCCACACAGTCCTCTCTGGACGCCGTCGGGCTTCACAGCGATGAAGGT
ACGCTCCATGTCTGCAGAGGTCACAGGTTCAGATCCCGTCACGGCGTCTGCAGGTCTGAGCTGAA
AACCCAAATCCGGCCTTTGGCTTCGGGTCGGAGGAGAACTTGTGAAGAGGATTTTCCGGCGGGAT
GCGACACCC

Contig information - 2
Name Contig2
Clone count 78 clones
Length 894
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit PREDICTED: similar to NME1-NME2 protein [Pan troglodytes]
Score 557
Evalue 3.90383e-55
Detail
Sequence [Download: FASTA]
>Contig2
CTTTATTGATCAGTGTTTGCTCCGATTGATCGATGAAGAACAGGGTGGGAGGGGCTCCAGCCTGT
TCTCAGCTCCCTGATTGGCTCTTTACTCGTACAGGTAGGGCTGGAAGCAGGAGGTATAGTTGACA
AACTCCTCAGGTTTGAACCACAGGCCAACCTCCTTCTTGGCGTTCTCCAGGGTGTCGCTGCCGTG
GATGATGTTCCTGCCGATGTTGATGCACAGGTCGCCGCGGATGCTGCCGGGCTTGGAGTCGGCCG
GGTTGGTCTCTCCCAGCATCATCCTGACCAGCTTCACGATGTTCTGACCCTCCCAAACCTGAAAC
AAACAGACCTCCGTCATGTCTGAAGAAGAACCAGGAAGCCGGTCGGAAAGCGGTCTTTCTGGACC
ACCAGTGATGTGCGTCTGCATGCAGGTCAGGAGGGACGTTCTGCACACTCTGCTTTGACTTTCAG
GTTGAAACCTCCTGACTTGTGTCTTTGAGCATCAGAGCAGAGTCTGGAGAACCGCCTGTCCTCAG
GATCTGACAGCTGCTCCTCTGAAAGGTTCGGCTTTTAAGCCAGGTTCAGTTTGAGGTGAGCATCG
GATGCATCTGTCTCTGGCAGGACCTCGTGAGCAGTGCATTGTGGGAGTTACCATGGCAAAGACGG
GTCCAGAGGACATGTATTTGCAGAGTCCGCCATAGAAGGGCATGTCCTTCAGGTCCAGGTAGTGC
TGCTTCATGTGATCCTCAGAGGCCTGCAGGAATTTAGCGGCGACCAGGTGGAAGCCTCTCTGCTC
CAGACGCTTGATGATCTCGCCACACAGTCCTCTCTGGACGCCGTCGGGCTTCACAGCGATGAAGG
TACGCTCCATGTCTTTGGCTTCGGGTCGGAGGAGAACTTGTGAAGAGGA
/medaka