Strains

cDNA/BAC/Fosmid

Plasmid for Knock-in Experiments

Information

Medaka Tools

Medaka Strain
in Publications

References
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Related documents

Biological experiments for elementary, junior high and high school students (Japanese)
Medaka experiments that anyone can do (Japanese)
Life of my teacher Tatsuo AIDA (Japanese)

Featured Link

From spawning to hatching of medaka ~nibb×niconico 
A checklist of the parasites of medaka 
medaka SNP(Beta)
Official Endocrine Disruption Website
M-marker 2009
Ensembl Medaka
M-Base
NBRP Medaka Genome Project
MEPD
Genomicus - Synteny browser -
ZFIN
ZIRC
UTGB Medaka
UCSC In-Silico PCR
The Fish Biology Journal of Medaka (Vol.1 - Vol.3)
The Fish Biology Journal of Medaka (Vol.4 - Vol.11)
Introduction to Medaka (NBRP Online Forum 2020)

CLSTF06663     VD

Merge cluster information
Name CLSTF06663
Library ALL 275 cDNA [Download: FASTA]
olea 1 cDNA [Download: FASTA]
olea7k05 
oleb 1 cDNA [Download: FASTA]
oleb35o11 
olec 0 cDNA
olvl 0 cDNA
olli 9 cDNA [Download: FASTA]
olli18l02  olli22a01  olli25e02  olli30m05  olli31o08  olli3j23  olli47h16  olli56f22  olli61h11 
olbr 6 cDNA [Download: FASTA]
olbr20b13  olbr25g07  olbr33a07  olbr34j10  olbr48b13  olbr8e18 
olgi 63 cDNA [Download: FASTA]
olgi11e11  olgi11h05  olgi11i19  olgi12l11  olgi13d13  olgi13h05  olgi15d23  olgi15g12  olgi15j11  olgi15p18  olgi16e20  olgi16o13  olgi17m11  olgi1o07  olgi1p24  olgi20f15  olgi20p04  olgi23g13  olgi24l13  olgi24m23  olgi26g22  olgi26i01  olgi26n23  olgi27m13  olgi30l09  olgi31g09  olgi32m08  olgi33h22  olgi35g05  olgi36d03  olgi37o22  olgi38d01  olgi39b05  olgi39b13  olgi41o11  olgi41p07  olgi43c19  olgi43e09  olgi43h16  olgi46i01  olgi47d08  olgi49o16  olgi4e04  olgi4e13  olgi4j23  olgi50l04  olgi52c17  olgi54h11  olgi57l01  olgi58j13  olgi58p21  olgi59o23  olgi61i12  olgi61l21  olgi62d08  olgi62e14  olgi62i06  olgi62i12  olgi64n05  olgi65m15  olgi7g06  olgi7m01  olgi8l09 
olki 72 cDNA [Download: FASTA]
olki10b16  olki10c19  olki10d12  olki11i02  olki12m01  olki13a15  olki13e15  olki13p14  olki15m10  olki16a05  olki16h13  olki16o12  olki17o06  olki19j08  olki1b06  olki1g03  olki20b19  olki20g07  olki21d07  olki23k02  olki24b11  olki24o15  olki26c11  olki26f09  olki26o06  olki27o17  olki27o23  olki28a01  olki28i01  olki29p15  olki2e01  olki2j05  olki30f17  olki30h13  olki31d10  olki33f23  olki33m07  olki35j22  olki36l24  olki36n03  olki38a21  olki38p18  olki39m23  olki3m15  olki40b20  olki42g17  olki43m04  olki44a03  olki46h10  olki46k15  olki48m18  olki50c07  olki51e14  olki52p17  olki53i09  olki54i01  olki55b09  olki57a09  olki57a18  olki57j23  olki57m09  olki58d06  olki59l02  olki59l07  olki61b07  olki62l04  olki63l06  olki64c20  olki64j17  olki6c01  olki6i21  olki8o21 
olsp 116 cDNA [Download: FASTA]
olsp10b03  olsp10f20  olsp11b21  olsp11j16  olsp11m07  olsp12j19  olsp12l22  olsp13b19  olsp13j17  olsp14i24  olsp14j20  olsp15b17  olsp16i18  olsp17h22  olsp17i15  olsp17p05  olsp18m01  olsp19i09  olsp1d23  olsp20l11  olsp20n04  olsp21e13  olsp21e24  olsp22g13  olsp24f04  olsp25b23  olsp26e11  olsp26i06  olsp26j07  olsp26k10  olsp26m08  olsp27a24  olsp27b06  olsp27b14  olsp27c07  olsp27h01  olsp27i08  olsp28e12  olsp29c14  olsp29i06  olsp29p23  olsp2f12  olsp30c19  olsp30i03  olsp31c01  olsp31o06  olsp32g05  olsp32i15  olsp32j03  olsp32n23  olsp33g16  olsp33l14  olsp33n01  olsp34h14  olsp34p04  olsp35d10  olsp36o15  olsp38a02  olsp38c24  olsp39a06  olsp39b21  olsp3c08  olsp40a08  olsp41a15  olsp41b20  olsp41i19  olsp41j14  olsp41o02  olsp42h03  olsp42i19  olsp42p24  olsp43g21  olsp43i19  olsp44b17  olsp44e10  olsp44k17  olsp46f21  olsp46h23  olsp46j06  olsp46l24  olsp47j03  olsp47n22  olsp48b20  olsp48b21  olsp48c05  olsp49l04  olsp4b05  olsp4i01  olsp4n23  olsp4o21  olsp50k03  olsp51m15  olsp52i16  olsp52i24  olsp52j17  olsp53k16  olsp53n23  olsp54h02  olsp54p20  olsp57c23  olsp58j10  olsp59a16  olsp5d02  olsp61e15  olsp64k17  olsp65e23  olsp65g24  olsp7a07  olsp7a15  olsp7m19  olsp8c07  olsp8l21  olsp9a13  olsp9b15  olsp9j20  olsp9n14 
olte 3 cDNA [Download: FASTA]
olte1a02  olte28i23  olte50k14 
olova 4 cDNA [Download: FASTA]
olova18m19  olova1g24  olova4a16  olova51j23 

Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/


Contig information - 1
Name Contig1
Clone count 7 clones
Length 755
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit MHC class II antigen [Oryzias latipes]
Score 962
Evalue 3.11133e-102
Detail
Sequence [Download: FASTA]
>Contig1
GCGAGTCGTCAGTCTGACAGCAAACACAGACATGGACTCTTCATCTCTCTGCCTCCTCTTCCTCA
CAATGTGCTCTGCAGATGCATTTTTACGGTACGACGTGGATCGTTGTGTCTTTAACTCCACTGAT
CTGAAAGACATCGAGTACATTTACTCCATGTATTACAACAAAAAAGAGTTCACCAGGTTCAGCAG
CAGTTTGGGGAAATATGTTGGATACACGGAGTATGGAGTGAAGACAGCAGAACGCGCGAACAAAG
ATACTTCAGAACTGAGCGCCAGGAAAGCTCAGAAGGAAACCTACTGCAAACACAACATTGATAAC
TGGTACAAAAACATGCTGTCTAAATCCGTCCAACCCAGAGTCAGAGTCCAGTCTCTGGCGCCCTC
TGGTGGTCACCATCCCGCCATGCTGGTCTGCAGCGTCTACGACTTCTACCCCAAGACCATCAGGG
TCAGCTGGCTCCGAGGCAAGGAGGAGGTCTCCTCTGACGTCACCTCCACCGCTGAGATGGAGGAT
GGGGACTGGTACTACCAGATCCACTCCCACCTGGAGTACACGCCCAGGTCTGGAGAGAAAATCTC
CTGTAAGGTGGAACACGCCAGCCTGAAGGATCCTCTGGTCACAGAGTGGGGTGAATACCTGTCTC
ACCTGTCTGTGTGTCTCACCTGTCTGTCTCTGTCTCACCTGTCTTGTTTGTCTGTATCACCTGTC
TCTCTTACCTGTCTGTCCTCAGACCCGTCCATGCCAGAGT

Contig information - 2
Name Contig2
Clone count 87 clones
Length 1291
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit MHC class II antigen [Oryzias latipes]
Score 1187
Evalue 6.03272e-128
Detail
Sequence [Download: FASTA]
>Contig2
GGTGCACACGTACGTGCACAGCTGACCACAGGTCCATGTGGAGCCTAAAGGTCTGGATGAAGGTT
TTCTGCTCGTTGTAGGAGGAGCTGCAGCAACGTTCTCATGAATGAAAGTTCTACTGTTCAGGAGA
AAAGCTGTGAGGTTCTGGACGAGAAGAACCGTCTGAGGAAGAACCAGAACCTGTGAGGAAGAGTT
CTGCTGAGTTTCCATGAGATCCGATCCTGTTCCTGTGAAGTCTGCCTGGTAACAGCTGACAGGGC
GGTCACGTGACCCGTGGAGTTTATAGCCAGTTCTCCGTCCGAGTCGTCAGTCTGACAGCAAACAC
AGACATGGACTCTTCATCTCTCTGCCTCCTCTTCCTCACAATGTGCTCTGCAGATGCATTTTTAC
GGTACGACGTGGATCGTTGTGTCTTTAACTCCACTGATCTGAAAGACATCGAGTACATTTACTCC
ATGTATTACAACAAAAAAGAGTTCACCAGGTTCAGCAGCAGTTTGGGGAAATATGTTGGATACAC
GGAGTATGGAGTGAAGACAGCAGAACGCGCGAACAAAGATACTTCAGAACTGAGCGCCAGGAAAG
CTCAGAAGGAAACCTACTGCAAACACAACATTGATAACTGGTACAAAAACATGCTGTCTAAATCC
GTCCAACCCAGAGTCAGAGTCCAGTCTCTGGCGCCCTCTGGTGGTCACCATCCCGCCATGCTGGT
CTGCAGCGTCTACGACTTCTACCCCAAGACCATCAGGGTCAGCTGGCTCCGAGGCAAGGAGGAGG
TCTCCTCTGACGTCACCTCCACCGCTGAGATGGAGGATGGGGACTGGTACTACCAGATCCACTCC
CACCTGGAGTACACGCCCAGGTCTGGAGAGAAAATCTCCTGTAAGGTGGAACACGCCAGCCTGAA
GGATCCTCTGGTCACAGAGTGGGACCCGTCCATGCCAGAGTCAGAGAGGAACAAAGTGGCCATCG
GGGCTTCTGGGCTGATTCTGGGTCTGGTCTTGTCTCTGGCTGGATTCATCTACTACAAGAGGAAG
GCCAGAGGTCGTATTCTGGTTCCCAGCAGCTGAGGTTCTTCTGTTCCTGCAGACAGATGGGTCCA
CTTGTGGACCCAGTAGAACCTGATCCAGAACATCTCACTTCTTTCTGGGTTCTGTGGGAGGACTG
TGGTTCTGGATCCAGTCTGTCATTATTTTCTTTAATCAGGTGTTGTGGTCTGGATGATTCTCTGC
TGTTCTTCATATCTTTAACCCTTGTGCTATCCTATGGGGTCCAGATGACCCCCCCC
/medaka