Strains

cDNA/BAC/Fosmid

Plasmid for Knock-in Experiments

Information

Medaka Tools

Medaka Strain
in Publications

References
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Related documents

Biological experiments for elementary, junior high and high school students (Japanese)
Medaka experiments that anyone can do (Japanese)
Life of my teacher Tatsuo AIDA (Japanese)

Featured Link

From spawning to hatching of medaka ~nibb×niconico 
A checklist of the parasites of medaka 
medaka SNP(Beta)
Official Endocrine Disruption Website
M-marker 2009
Ensembl Medaka
M-Base
NBRP Medaka Genome Project
MEPD
Genomicus - Synteny browser -
ZFIN
ZIRC
UTGB Medaka
UCSC In-Silico PCR
The Fish Biology Journal of Medaka (Vol.1 - Vol.3)
The Fish Biology Journal of Medaka (Vol.4 - Vol.11)
Introduction to Medaka (NBRP Online Forum 2020)

CLSTR01795     VD

Merge cluster information
Name CLSTR01795
Library ALL 77 cDNA [Download: FASTA]
olea 1 cDNA [Download: FASTA]
rolea3l14 
oleb 2 cDNA [Download: FASTA]
roleb55e21  roleb62o21 
olec 3 cDNA [Download: FASTA]
rolec32l11  rolec48f01  rolec7h18 
olvl 1 cDNA [Download: FASTA]
rolvl43n04 
olli 2 cDNA [Download: FASTA]
rolli17p02  rolli55g22 
olbr 12 cDNA [Download: FASTA]
rolbr20k10  rolbr35a01  rolbr38l12  rolbr50k06  rolbr55c20  rolbr55h11  rolbr58l14  rolbr58n06  rolbr58p02  rolbr64i19  rolbr64i22  rolbr9j14 
olgi 23 cDNA [Download: FASTA]
rolgi10o17  rolgi12d12  rolgi17i20  rolgi19p06  rolgi1k08  rolgi21e20  rolgi27p05  rolgi30f11  rolgi32m06  rolgi36f04  rolgi40n14  rolgi41p18  rolgi47a22  rolgi47f21  rolgi48l08  rolgi49n10  rolgi57o19  rolgi5l05  rolgi61f22  rolgi65h01  rolgi7f08  rolgi7n10  rolgi8h09 
olki 20 cDNA [Download: FASTA]
rolki10n11  rolki11l03  rolki11p07  rolki13c05  rolki14b21  rolki16b15  rolki1k03  rolki26e04  rolki2o18  rolki30i06  rolki36i13  rolki40n20  rolki42p01  rolki47f24  rolki48j23  rolki4f08  rolki51l08  rolki52f08  rolki58a04  rolki58n24 
olsp 9 cDNA [Download: FASTA]
rolsp10a19  rolsp12e23  rolsp16n03  rolsp18l10  rolsp27k01  rolsp32g22  rolsp37j20  rolsp51n14  rolsp8g18 
olte 2 cDNA [Download: FASTA]
rolte21n06  rolte31g06 
olova 2 cDNA [Download: FASTA]
rolova40i01  rolova44m22 

Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/


Contig information - 1
Name Contig1
Clone count 5 clones
Length 881
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit Beta-2-microglobulin precursor [Anoplopoma fimbria]
Score 214
Evalue 2.31929e-16
Detail
Sequence [Download: FASTA]
>Contig1
AGAAGGAATTACATTTCTTTCCATGAGAATCTGTTTGAAGAGTTTTCAAACAGCTGTTATATAAA
ACACACTGACGACAGTTACATCTGTAAGTGCTCCAAAAGCCAAAGTGCAAAGATCCACCACAAGT
TACATAAAGTAAAGTTCATTGAGATTTAACAGACTCCATAAGGTAAAAACGAATGCACTGATCTA
CATTTCATTTTTATAAGTTATACATTTTATGCTTTAAAAAAGCTAGATCTTTAATTTAAGGTGTC
TTGATGTTGCCGCAACGCTTTTCTAGTGAAAGTGAAGTTTTTTGGTACATTCCTCGGTTGATTGA
AGTTCTGAGCAGAAACAGGATTCATCATTAAAGAGTTTGCTCAGAAATGCGTACGGCAGCGTGCA
GATTCGCTGCCGCTCTGCATTATGGGGTCCAATTCATCTGATTGACAGTTCTGGGTCAAAATAAT
CAGACGCAAAGAAAAGTGGAGTCAAGCTTCGCTCGTCTTCCGTCATCTTCATCACGTCTCCCTGC
GCAGCGTCAAGGGGGATTGCGGCCCATCATCGGGGAGGGGGGCTCTTCTTTCTGCCTTTGTGAGA
TCAGACACAGTCACACAGGTTACGGTTGGATTCAAACGTGTCGATTTCAAATGGACGACACGGTT
CTGACCTGGAGCAAAAGCTGTGCAGGGCTCACACATCCGGCTCCCAGGTGTAGGTCTTGGTGCCT
GTCGTGTGAGTGACCACACAAGTGTAAGACTCTCCTTTCTCTGGAGTGAAAGGAGCGTGTTTGGT
CAGGTGGTAATGCCAGCTCTCCTCAAAGGCCAGGTCAGTCTGTCCACCGCCGGGGCAGCTCATTT
CCATTCTTCAGCAGCTTAATGGAGATCTCTGGGGGG

Contig information - 2
Name Contig2
Clone count 68 clones
Length 933
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit Beta-2-microglobulin precursor [Anoplopoma fimbria]
Score 247
Evalue 3.66686e-19
Detail
Sequence [Download: FASTA]
>Contig2
GAGGATTACATTTCTTTCCATGGAGAATCTGGTTTGAAGAGTTTTCAAACAGCTGTTATATAAAA
CACACTGTACGACAGTTACATCTGTAAGTGCTCCAAAAGCCAAAGTGCAAAGATCCACCACAAGT
TACATAAAGTAAAGTTCATTGAGATTTAACAGACTCCATAAGGTAAAAACGAATGCACTGATCTA
CATTTCATTTTTATAAGTTATACATTTTATGCTTTAAAAAAGCTAGATCTTTAATTTAAGGTGTC
TTGATGTTGCCGCAACGCTTTTCTAGTGAAAGTGAAGTTTTTTGGTACATTCCTCGGTTGATTGA
AGTTCTGAGCAGAAACAGGATTCATCATTAAAGAGTTTGCTCAGAAATGCGTACGGCAGCGTGCA
GATTCGCTGCCGCTCTGCATTATGGGGTCCAATTCATCTGATTGACAGTTCTGGGTCAAAATAAT
CAGACGCAAAGAAAAGTGGAGTCAAGCTTCGCTCGTCTTCCGTCATCTTCATCACGTCTCCCTGC
GCAGCGTCAAGGGGGATTGCGGCCCATCATCGGGGAGGGGGGCTCTTCTTTCTGCCTGGAGCAAA
AGCTGTGCAGGGCTCACACATCCGGCTCCCAGGTGTAGGTCTTGGTGCCTGTCGTGTGAGTGACC
ACACAAGTGTAAGACTCTCCTTTCTCTGGAGTGAAAGGAGCGTGTTTGGTCAGGTGGTAATGCCA
GCTCTCCTCAAAGGCCAGGTCAGTCTGTCCACCGCCGGGCAGCCTCATTTCCATTCTTCAGCAGC
TTAATGGAGATCTCTGGGGGGGTGGAAGCCACTGGTGTGACAGATCAGAGTGTTTTCTTTTCCCA
AGGTACCGGGCCAAACGGCTGTACACCTGGACCTTTGGGGGCTTGTTCATTGCGTTCCCTTTATG
GAGACTCCGAGATCCACGCAAAC
/medaka