CLSTR00020     VD

Merge cluster information
Name CLSTR00020
Library ALL 110 cDNA [Download: FASTA]
olea 0 cDNA
oleb 1 cDNA [Download: FASTA]
roleb61h12 
olec 4 cDNA [Download: FASTA]
rolec23i06  rolec54l06  rolec55m12  rolec8l19 
olvl 67 cDNA [Download: FASTA]
rolvl10k22  rolvl11a07  rolvl11p11  rolvl12j20  rolvl13e22  rolvl14o02  rolvl16a10  rolvl16d12  rolvl17d20  rolvl17n02  rolvl18a05  rolvl1b07  rolvl1g24  rolvl22b11  rolvl22l16  rolvl23p05  rolvl24e23  rolvl24l02  rolvl25a09  rolvl25i06  rolvl25p03  rolvl26i06  rolvl26l05  rolvl26m19  rolvl28p03  rolvl29g14  rolvl2e05  rolvl30d13  rolvl31l19  rolvl31o11  rolvl32f07  rolvl33e24  rolvl33o04  rolvl35d06  rolvl36j21  rolvl38a20  rolvl38d09  rolvl39a20  rolvl40b20  rolvl41a14  rolvl41c24  rolvl41e21  rolvl42c23  rolvl42g24  rolvl43e17  rolvl45n16  rolvl49n07  rolvl50b03  rolvl52f10  rolvl53n22  rolvl54j14  rolvl56i05  rolvl57m06  rolvl58o22  rolvl59i24  rolvl61a10  rolvl62c04  rolvl62d10  rolvl62i02  rolvl64a08  rolvl65h24  rolvl6f23  rolvl7d02  rolvl7l13  rolvl7l15  rolvl8c04  rolvl9g04 
olli 37 cDNA [Download: FASTA]
rolli11c17  rolli13k12  rolli14i06  rolli14i12  rolli15a20  rolli16d09  rolli17i14  rolli1m17  rolli21a18  rolli22e15  rolli22n11  rolli25g02  rolli25h12  rolli26l23  rolli29m16  rolli2f12  rolli34g06  rolli36i10  rolli42b12  rolli42j01  rolli4g07  rolli50b08  rolli50e14  rolli52a23  rolli53n21  rolli54b24  rolli57a24  rolli58k10  rolli5b17  rolli60f20  rolli61i22  rolli61n01  rolli62h23  rolli64a04  rolli64h21  rolli6e08  rolli8o14 
olbr 0 cDNA
olgi 0 cDNA
olki 0 cDNA
olsp 0 cDNA
olte 0 cDNA
olova 1 cDNA [Download: FASTA]
rolova53g06 

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Contig information - 1
Name Contig1
Clone count 3 clones
Length 964
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit complement component C3-2 [Oryzias latipes]
Score 1562
Evalue 1.27526e-171
Detail
Sequence [Download: FASTA]
>Contig1
AAAAGGAGAAGTTTTTTCTTTCTTTATTGCTGACATGCAAACACTCTGAACTGTTCTAGCATCTC
ATCTAAGCCCATGCATGTGGCTCTGTGTTCATCCCCTTGACACTCCTCTGCTGTTGGCCAATACT
CAATCCAAGTTCTCTCTCCAAGGACGTACTGATATGTTTGTTGTTTTTCATCTCTGTGGATATAT
CTGGATGATCCCATGATCAGGTATGTTTTACCTTTCAGCAGATTCAAAGCATCTTTGCAATGGGG
ATAACTGAGGAATGGCCGCAGTTTTCCCATGGGGCCAACATCTGTACTTCCTTCTTTGATGGAGT
CCTGCACCCGCATGGCATAGATGTCTATAGACGGTTTGTGGACAACATCTTCCACCAGAACTTTG
TACGCATATTCAATTTTGCTGCTCTCTGTGCTCTCACAGATTTTAGATGCTCGCTCATCGTTGCT
GATTTGACCATTCTTCTGCATGCTGCAGTTCTCTTCTGCACATGTGCACTCGTCATCTCTGCAGA
GCTGCAGCAGCTGTCCTCCCTCCCTCTCTGGATGGTAAAACTTCACACAAGGTGTTTGCTCATAA
TATTCATAGACAGACACTGCTGCTGGCTGAAGAACACCCACCTCCATGGTCTGCTGGACCCTGAA
ACTGATCTCCTCTGGTCGCGTGTGAGAAACCTTATCCAGGTAGATGATGAGTGAGCCTCGTTCCG
ACAGAGCTGTATTCATTTCATACCTTCTAATGATGGGAGCTCGCCCTCCAGACAGAGCTTTTAGG
TCATCTAAGTTGGGAGTGAAGCCTGTCTGCATACCGATGTCTACGATGGACATGGCGGCATCACG
ATTGCTGTCCTTGTATAAAACCTTTATCTGAAGCTGGTAGACCTTTTCATTCCCAATATTCTTAT
CTGGAAGCAGCTGCACTGACACGTTAAACTTCTGGCAGTCACTTTCCTTTTCTT

Contig information - 2
Name Contig2
Clone count 13 clones
Length 978
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit complement component C3-2 [Oryzias latipes]
Score 1383
Evalue 7.43627e-151
Detail
Sequence [Download: FASTA]
>Contig2
AAATCCCAAATAACATAGCCCAGGGTTGGTACATTTTATTCTGCATAAATTGCTTGACAGAAAAA
AACAAAAAGGAGAAGATTTTTCTTTCATTATTGCTGACATGCAAACACTCTGAACTGCTCTAGCA
TCTCATCTAAGCCCAGGCATGTGCTCTCTGTGTTCATCCCCTTGACACTCCTCTGCTGTTGGCCA
ATACTCAATCCAAGTTCTCTCTCCAAGGACGTACTGATATGTTTGCTTTTTTTCATCTCTGTGGA
TGTCTCTGGATGATCCCATGACCAGGTATGTTTTACCTTTCAGCAGATTCAAAGCATCTCTGCAA
TGGGGATAACTGAGGAATGGCCGCAGTTTTCCCATGGGGCCAACATCTGTACTTCCTTCTTTGAT
GGAGTCCTGCACCCGCATGGCATAGATGTCTATAGACGGTTTGTGGACAACATCTTCCACCAGAA
CTTTGTACGCATACTCAATTTTGCTGCTCTCTGTGCTCTCACAGATTTTAGATGTTCGCTCATCG
TTGCTGATTTCATCGTTCTTCTGCTTGCTGCAGTTCTCTTCTGCACATGTGCACTCGTCATCTCT
GCAGAGCTGCAGCAGCTGTCCTCCCTCCCTCTTTGGATGGTAAAACTTCACACAAGGTGTTTGCT
CATAATATTCATAGACAGACACTGCTGCTGGCTGAAGAACGCCCACCTCCATGGTCTGCTGGACC
CTGAAACTGATCTCCTCTGGTCGGGTGTGAGAAACCTTGTCCAGGTAGATGATGAGTGAGCCTCG
TTCCGACAGAGCTGTATCCATTTCATACCTTCTAATGATGGGGGCTCGCCCTCCAGACAGAGCTT
TTAGGTCATCTAAGTTGGGAGTGAAGCCTGTCTGCAAACCGATGTCTAAGATGGACATGGTGGCA
TCACGATTGCTGTCCTTGTATAAAACCTCTATCTGAAGCTTGTANGCATTATAATTCCCAATTTT
CTT

Contig information - 3
Name Contig3
Clone count 21 clones
Length 1181
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit complement component C3-2 [Oryzias latipes]
Score 1182
Evalue 2.00785e-127
Detail
Sequence [Download: FASTA]
>Contig3
TATTATTTTTTTAATTGACAGGAATCTGGTGGAAACTTTTCAGTCACTTGAGCACTAAAAGTAGC
TTGCCGGCATGTTACACGAGAAAATTTCTATGTGGAACGTTTCGTTGCAAATGGATAAGGGATTA
GTGCATGGACAGAAGAACAGATGGAAGAATGGCTTGCTTACAACTTCAAGACAAAAAAAAAAACA
ACTGTAGGCCACCAGGAGTTCTGCTTAAAATATGGATTTATTGCAACAGGTAATTTCCCACACAC
GGGAGCCTGTTTTATATAGTACTCACAACATTCATTGCCAGGCATATGTTACTAGAAATTTGTGT
TACACTGGTGTTATCTGTTGTTATTATTAATATTAATTTGTTTTTTCTGATGATCACAAAAAGGT
TTTTTTTAATCGAACGGAAATTAAGCATCCACGGCAACCCCCACCCATTTCCACTGGGCCTTGGT
AAAATCCCGCAGCCACATAAAGGTTGGGGAACACTTTTTAACAGAAAAAAAAAATCTTTATTGCT
GACATGCAAACACTCTGTACTGTTCTAGCATCTCATCTAAGCCCAGGCATGTGTCTCTGTGTTCA
TCCCCTTGACACTCCTCTGCTGTTGGCCAATACTCAATCCAAGTTCTTTCTCCAAGGACGTACTG
ATATGTTTGCTTTTTTTCATCTCTGTGGATGTCTCTGGATGATCCCATGATTAGGTATGTTTTAC
CTTTCAGCAGATTCAAAGCATCTCTGCAATGGGGATAACTGAGAAATGGCCGTAGTTTTCCCATG
GGGCCAACATCTGTACTTCCTTCTTTGATGGAGTCCTGCACCCGCATGGCATAGATGTCTATAGA
CGGTTTTTGGACAACATCTTCCACCAGAACTTTGTACGCATATTCAATTTTGCTGCTCTCTGTGC
TCTCACAGATTTTAGATGTTCGCTCATCGTTGCTGATTTGACCGTTCTTCTGCATGCTGCAGTTC
TCTTCTGCACATGTGCACTCGTCATCTCTGCAGAGCTGCAGCAGCTGTCCTCCCTCCCTCTCTGG
ATGGTAAAACTTCACGCAAGGTGTTTGCTCATAATATTCATAGACAGACACCGCTGCTGGCTGAA
GAACGCCCACCTCCATGGTCTGCTGAACCCTGAAACTGATCTCCTCTGGTCGGGTGTGAGAANCN
TTATCCAGGTA

Contig information - 4
Name Contig4
Clone count 69 clones
Length 1082
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit complement component C3-1 [Oryzias latipes]
Score 1291
Evalue 2.58648e-150
Detail
Sequence [Download: FASTA]
>Contig4
CTTATCCTTGGTAGGTTTTTTATTTGGCAAAATAAAAGCAAAATTCCAAATAACACAGCCCAGGG
TTGGTACATTTTATTCTGCACACATCTTTTAACAGAAAAAACAAAAAGGAGAAGTTTTTTCTTTC
TTTATTGCTGACATGCAAACACTCTGAACTGCTCTAGCATCTCATCTAAGCCCAGGCATGTGGCT
CTGTGTTCATCCCCGTTGACACTCCTCTGCTGTTGGCCAATACTCAATCCAAGTTCTCTCTCCAA
GGACGTACTGATATGTGAGCTGTTTTTCATCTTTGTGAATGTCTCTGGATGATCCCATGATCAGG
TATGTTTTACCTTTCTGCAGTTTCAAAGCATCTCTGCAATGGGGATAACTGAGGAATGGCCGCAG
TTTTCCCCTGGGGCCAACATCTGTACTTCCTTCTTTGATGGAGTCCTGCACCCGCATGGCATAGA
TGTCTATAGACGGTTTTTGGACAACATCTTCCACCAGAACTTTGTACGCATATTCAATTTTGCTG
CTCTCTGTGCTCTCACAGATTTTAGATGTTCGCTCATCGTTGCTGATTTGACCATTCTTCTGCAT
GCTGCAGTTCTCTTCTGCACATGTGCACTCGTCATCTTTGCAGAGCTTCAGCAGCTGTCCTCCCT
CCCTCTCTGGATGGTAAAACTTCACACAAGGTGTTTGCTCATAATATTCATAGACAGACACTGCT
GCAGGCTGAAGAACGCCCACCTCCATGGTCTGCTGGACCCTGAAACTGATCTCCTCTGGTCGGGT
GTGAGAAATCTTATCCAGGTAGATGATGAGTGAGCCTCGTTCCGACAGAGCTGTATTCATTTCAT
ACTTGCTAATGAGGGGGAAATCGCCCTCCAGACAGAGCTTTTAGGTCATCTAAGTTGGGAGTGAA
GCCTGTCTGCAAACCGATGTCTAAGATGGACATGGTGGCATCACGATTGCTGTCCCTTGTATAAA
AACCTCTATCTGAAGCTTGTAGACCTTTTGATTCCCAATATTCTTAGCTGGAAGCAGCTGCACTG
ACACGTTAAACTTCTGGCAGTCACTTTCCTTTTCTTCAGGCA
/medaka