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CLSTF00562
VD
| Merge cluster information | |||
|---|---|---|---|
| Name | CLSTF00562 | ||
| Library | ALL | 28 | cDNA [Download: FASTA] |
| olea | 4 |
cDNA [Download: FASTA] olea1n17 olea24h10 olea40e06 olea45m09 |
|
| oleb | 6 |
cDNA [Download: FASTA] oleb13o13 oleb22a05 oleb24i09 oleb31o15 oleb36f23 oleb41g18 |
|
| olec | 3 |
cDNA [Download: FASTA] olec1d17 olec65p04 olec6j02 |
|
| olvl | 4 |
cDNA [Download: FASTA] olvl10a04 olvl50g10 olvl51g10 olvl7m18 |
|
| olli | 0 cDNA | ||
| olbr | 5 |
cDNA [Download: FASTA] olbr26e02 olbr44o24 olbr59f22 olbr64d04 olbr6m10 |
|
| olgi | 2 |
cDNA [Download: FASTA] olgi1f21 olgi24j23 |
|
| olki | 2 |
cDNA [Download: FASTA] olki52o23 olki65a09 |
|
| olsp | 0 cDNA | ||
| olte | 2 |
cDNA [Download: FASTA] olte13f08 olte58d10 |
|
| olova | 0 cDNA | ||
|
Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/ |
| Contig information - 1 | |
|---|---|
| Name | Contig1 |
| Clone count | 2 clones |
| Length | 467 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | unknown [Medicago truncatula] |
| Score | 165 |
| Evalue | 2.82133e-10 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig1 ATGAAATTCGATCTTACAGTTAAGAAAGAAAGAAAAAGATAATCTGTTGTATTTTAACCCCTGTG CTATCCTAGGCACTTTAACGTTGGGGGTTGGGTCATCTAGACCCACTAGACAGTGCTCTGAACCT TTTTTCTTCAATGATTTGTGATCTTCACTGGTGTCCATGGATTACATGAAATCTTTCCACCTTTA TCCACCTTTGTCACGGTAGGGAGAAAACATCAATGTAAGGGTGGGGTCATCTGGACCCCATTGGA TAGCACAAAGGTTAAATGGTCAGGGTCTTTTAGTGTCATAATTCAAATAAAAATGCATTTTGCAC TTTTTAAGTTACTGTAATATAAAAAATGATAAATAAACTGCATTTAAAACAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNANAAAAAAAANAAAAAAAAAA NCAANAAANAAA |
| Contig information - 2 | |
|---|---|
| Name | Contig2 |
| Clone count | 2 clones |
| Length | 758 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | hypothetical protein [Plasmodium falciparum 3D7] |
| Score | 88 |
| Evalue | 0.69615 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig2 CCTTTGTCATGGTAGGGAGAACACGTCAATGTAAGGTTGGGGTCATCTAAGCCCCACCCTTTTTT GACGGGAAACACCGTCTAAAAAAAAGGAATGGGGCCAAAATCTCTTATACGAATAAAGAAAAAAA GAAAAAGTTTCAAAATCAATGTGGATATCCAAATGAAGTTTTGAAATTATTATGGGATGGCCACA GGACCCACAAATTACCATTTTGTGAGAAAATTGGTGATTTTTACTTTTTCCCACAATGTGGGAAA GAAAACTTTTGCTTGAGCCATCTTTACGAAACTTCACACACATGCTCCCAGTTTAAGTTCACAAC TACACCAAACGTTTTCTTGACCCTTGACCTCGGGAAGAGACAGCCATCTTGAATTAAAAACAAAC AAAATAAAATCCCCTTTCGTACCAGCTTCAAATTTAAACTCTTCTCAGAGATTTTCGATGTTTCG AAAGCTCTTCAAGCATTTTTGGGAAGCGACTCTGGGAAAAAATGTTGGTTTGAAAGTTTGTAAAT TTTGAGCGACGTTAGCAAAAGTGGTGTTCCCCTGTTTCTCATAAATTTTTCACCAGAATATAATG AAACTGTATGTAATACATGCATACTTGGCCCAAACTGAACGAAACAACATAACAGGCAAAATGAA CATACTAGGAATGTGGTTAATAAAAATAACCCTCAGTTTCCAAGGAAATCCAAAAATAAATGTTT GCCAATTCTTTCAAAAATTATACAAACCTGTTCAGCACCACCA |
| Contig information - 3 | |
|---|---|
| Name | Contig3 |
| Clone count | 3 clones |
| Length | 830 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Score | 82 |
| Evalue | 4.05434 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig3 ATTATTTTGATTTTTGTAGAAAGGTAATTTACGGAAAATGATAAAAAGCTGGTTGGTCAGTTGGT TGTATTTGTGCAGATGCATGCTATGCTAAAGGTTAGAAATGCTGTCACTGACTGTATCCCAGAGA AAGACACCTTTCTGTCACAAAGGCTGCACAGCTGCAGACCCGCATGCCGTAACCCTTGTGCTATC CTAGGCACTTTAACGTTGGGAGTTGGGTCATCTAGACCCACTAGACAGTGCTCTGAACAATTTTT CTTCAATGATTTGTGATCTTCACTGGTGTTCATGACTTACATGAAATCTTTCCACCTTTGTCATG GTAGGAATAACATGTCAAAGGAAGGGTGGGGTCATCTAAGATAGCACAAGGGTTAAGACACTAGG GAACACATGGAGGAATGAAGGCAAAAAATACATGTATGCGCTGGAGATGGGATGCAGGCAGAAAG CAGAGCTCTGTGGGTAAATACAAAGATGGCCTGATGGTGGCTTGGAAGGGCAGAATGATTCCCCC AAGTTTTTCTTGTGAATTAAATGTGGGGGAGGAGGAGGAGATATGTTGAGTAGTGAGAGACAGCA AGACATCGGGAAAGTTGTGACAAAAATTATTGATGCTGTACGTGGAAAAAGATCAGGAAAAAAAA ATCAGTGCGGGTCAACTCTGCTGCTCGTGTTTTTAGGCCTTTTTATTGCATCTTTGACTGTTCTT TTCACCCTCATCCTCAGTTCAGTCTGTCCATCAAAAAAGATGCAGAAACACCTTCACTTACCATT TCAAAGTTGGAATAAAAAAAAGGAAAGTCATATATTTAACAAAAAAAAAA |
| Contig information - 4 | |
|---|---|
| Name | Contig4 |
| Clone count | 21 clones |
| Length | 2307 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | hypothetical protein BRAFLDRAFT_195609 [Branchiostoma floridae] |
| Score | 645 |
| Evalue | 7.94727e-67 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig4 CAGGAGAAAAGCCTTTTTCTTGTCAAGAATGTAAAAAATATTTTGGTAATACATCTCATCTCAAA GTACACATGAGAACTCACACAGGAGAAAAGCCTTTTACTTGTAAAGAATGTGATAAAAGTTTTAG TGAAAAATCAAAACTCAAAAGACACATGAGAATTCACACAGGAGAAAAGCCTTTTACTTGTAAAG AATGTGATACAAGTTTTAGTCGTATATCTCTTCTCAAATCACACATGAGAACTCACACAGGAGAA AAGCCTTTTTCTTGTAAAGAATGTGATAAAGGTTTTAGTCACAGATCTAGTCTCAAAACACACAT GAGAACTCACACAGGAGAAAAGCCTTTTTCTTGTAAAGAATGTGATACAAGTTTTAATCAAATAT CTAATCTCAAATCACACATGAGAACTCACACAGGAGAAAAGCCTTTCCCTTGCGATAAATGTGAT GCCAGTTTTAGTCGAATACCTCTTCTAAAAACACACATGAAAACTCATACAGGTGAGAGATAGTT TTTATGGCTGATAAATGGCTCAGTCATAAATGTAATTTAGTAAAATACATTAGAACACACACAGG TGAGAAGCTTTTCTTTTGTAACGAAAAGAAAATATAAAGGATTTAGAGAAAAATCTCAACTTCAA AAACAGAAAAACATAGAGCAGAAAACTTGTACAGTATATGGGAAAATATTGTGTAAATGCCATTT GGTCGTTTTTTTTTTGTTTGTTTTTAAAAGAAAGAACTTGTTTTGTTTATATACAAAAAAGGAAA ATGTTGGAATATTTCAAGCCTTAGTTTAATTTAGTGAATTTATTGTATAGGTTTAAATAAAACGA TGTTCTTTGTCCAGGAAAGAAAAGAACATTCTAACAAATGTTTATGTCAAAAACATTTAGTGATC ATGTTTAACCCTTGTGCTATCCTAGACACTTTACCATTGGGAGTTGGGTCATCTAGACCCACTAG ACAGTGCTCTGAACCTTTTTTCTTCAATGATTTGTGATCTTCACTGGTGTCCATGGATTACATGA AATCTTTTCACACCTTTATCCACCTTTGTCATGGTAGGGAGAACACGTCAAAGTAAGGGTGGGGT CATCTGGACCCCACAGGATAGCACAAGGCTTAAGCCAGCTTTTAGACACATCATCCCCCATGTGC AACATCCGGTCATTGTGTTTTTTATCCTTTCAGTCTGCAGCACCTAGAGACTGGGATAATTAACA AAACACCCTTAGAATGGGTTGACACTTGATGCTGGTTCTTCCTCAGTGCCTGGCAATTGAGGGTC CCCTGTCCGTCCAATCACAGTTCATAGAAAGTCGAGCCATTTCTGATGTTTAGTTTGATTTGTAT CATAGTTTATCGGAATACTAAACACTTTATTGTCAGGAGGCAGCTAAGCTGCTTTCCCAAATGTG CAGATTTCCAGCTGCATTCAGCTGCACGGTTTTCACAACAAACCCAGATCTCACATCAGTACCTG GGAACTTAACCCTTGTGCTATCTTAGCCACTTTAACATTGGGAGTTGGGGTCATCTAGACCCACT AGACAGTGCGCTGAACCTTTTTTCTTCAATGATTTGTGATCTTCACTGGTGTCCATGGATTACAT GAAATCTTTCCTCCTTTATCCACCTTTGTCATGGTAGGGAGAACACATCAATGGAAGGGTGGGGT CATCTGATCCTCCTCCATGTGATAGCACCAGGGTTAAATGACAGTGGAGTCCACATTTGAAGACT AAAAATAAAATGAAGAAAAGGCGGCTTGATAAATGAAAATGGATTAATATAAAATCTGGGTTGAT ATGAAATGTTACATCCTAGTCACTAATAAATGCTCGCTGTGAACTGCTTCATTGTAACTGAAGTT CACCCATTGGGAGGCTTGAGAACATGTTCCCGCCCCTTTAGGGCTCCCCCCACTTTTGTTCAACT TGCTGTGTGCCCCCTCCAGGAAGACGATGAGGCCCCTCTGGGGGCTCCAGAGTACGACGCAGCAC CTGAAAATGGTCTGCTGAGTCGAAATGAGCCGATTCGTGCAAAGGTGTCCAAGCTGACTGAGAAA CTGCGCAAACGTTACCCCACAGCCAGCACAGGGAACTGTTCCAACTGCAGCACAGTCTTCTCGGT CCTGAAGAAGAGGAGGAACTGCAGTAACTGTGGCAACAGCTTCTGTTCCCGATGCTGCTCCTTCA AGGTGTTAAGATCCTGCATGGGGGCCACAGCTCCGGAGGCTCAAAGAGAGACTGTGTTTGTGTGC GCTAGCTGTAACTCCTCCCTCATCAAGTCCCA |
