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Plasmid for Knock-in Experiments

Information

Medaka Tools

Medaka Strain
in Publications

References
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Related documents

Biological experiments for elementary, junior high and high school students (Japanese)
Medaka experiments that anyone can do (Japanese)
Life of my teacher Tatsuo AIDA (Japanese)

Featured Link

From spawning to hatching of medaka ~nibb×niconico 
A checklist of the parasites of medaka 
medaka SNP(Beta)
Official Endocrine Disruption Website
M-marker 2009
Ensembl Medaka
M-Base
NBRP Medaka Genome Project
MEPD
Genomicus - Synteny browser -
ZFIN
ZIRC
UTGB Medaka
UCSC In-Silico PCR
The Fish Biology Journal of Medaka (Vol.1 - Vol.3)
The Fish Biology Journal of Medaka (Vol.4 - Vol.11)
Introduction to Medaka (NBRP Online Forum 2020)

CLSTF11884     VD

Merge cluster information
Name CLSTF11884
Library ALL 262 cDNA [Download: FASTA]
olea 0 cDNA
oleb 0 cDNA
olec 2 cDNA [Download: FASTA]
olec20g07  olec55g07 
olvl 0 cDNA
olli 2 cDNA [Download: FASTA]
olli11i10  olli44a22 
olbr 3 cDNA [Download: FASTA]
olbr17e19  olbr19m08  olbr39e10 
olgi 74 cDNA [Download: FASTA]
olgi10a12  olgi10l09  olgi13n22  olgi15g18  olgi16i15  olgi16j03  olgi17e18  olgi17l24  olgi18j23  olgi18m24  olgi19j17  olgi19n09  olgi20j21  olgi21g05  olgi21g06  olgi22i08  olgi23e18  olgi23h12  olgi24g21  olgi24k16  olgi26j09  olgi27j02  olgi28b15  olgi28k01  olgi29m13  olgi2e18  olgi2g03  olgi2m09  olgi31h09  olgi31n02  olgi32d14  olgi33f19  olgi34i17  olgi37a01  olgi37e14  olgi37f15  olgi38e21  olgi39l01  olgi40j21  olgi41e11  olgi41e18  olgi41n06  olgi43o05  olgi44c02  olgi44h13  olgi44p13  olgi45a05  olgi46c23  olgi46l09  olgi46l18  olgi49g12  olgi49i08  olgi51g14  olgi51j22  olgi52c01  olgi52i21  olgi52n15  olgi53b01  olgi55c14  olgi56c21  olgi56f21  olgi58e03  olgi59o17  olgi5j18  olgi60c23  olgi63k07  olgi64f11  olgi65c05  olgi65d05  olgi8d23  olgi8f05  olgi8o13  olgi8o16  olgi9m19 
olki 66 cDNA [Download: FASTA]
olki10i12  olki11d19  olki11k22  olki12a14  olki13c12  olki13f13  olki15b09  olki15e10  olki15k06  olki16n21  olki21k15  olki22b03  olki22g24  olki22i03  olki23d03  olki24o14  olki24p14  olki28d24  olki28g10  olki28i23  olki28j08  olki29d10  olki2b05  olki2i13  olki33j19  olki33k03  olki34b15  olki35o02  olki37f12  olki38b03  olki38n20  olki39g03  olki39k22  olki3c03  olki41j19  olki42f01  olki43k01  olki44c04  olki45k10  olki46h09  olki47k07  olki47m12  olki48e03  olki48j24  olki49m06  olki4c21  olki4d03  olki4g15  olki4j08  olki4l12  olki53b22  olki53c09  olki55e13  olki55p15  olki56a15  olki58d11  olki5l22  olki60c02  olki60d11  olki61e17  olki62n15  olki63f23  olki7k19  olki8c08  olki8o08  olki9d24 
olsp 109 cDNA [Download: FASTA]
olsp10d01  olsp10e11  olsp11i13  olsp12k03  olsp12k15  olsp13l11  olsp14d20  olsp14k08  olsp14k18  olsp14o01  olsp15b11  olsp15f07  olsp15m23  olsp16i08  olsp16p16  olsp17p03  olsp18n21  olsp18n23  olsp19j09  olsp1i13  olsp1l16  olsp20m03  olsp22i23  olsp22m13  olsp23n05  olsp24d13  olsp24h19  olsp24j12  olsp24p05  olsp25l04  olsp26p08  olsp27b19  olsp28f14  olsp28g24  olsp28j10  olsp29d19  olsp29e22  olsp29f14  olsp29h01  olsp30l21  olsp30m03  olsp30m11  olsp30m14  olsp31k05  olsp31l01  olsp32k05  olsp33f05  olsp33o18  olsp35k11  olsp35m03  olsp35o17  olsp37b14  olsp37e20  olsp37e24  olsp37i12  olsp37k05  olsp37n05  olsp38h06  olsp39e24  olsp39l21  olsp39n05  olsp3k21  olsp3n08  olsp3o23  olsp40a15  olsp40b18  olsp40i20  olsp42o17  olsp43e10  olsp43h03  olsp43i18  olsp43j23  olsp44o13  olsp47i16  olsp48a04  olsp49g06  olsp49i17  olsp4b03  olsp4d06  olsp4p16  olsp50c05  olsp50d03  olsp50i10  olsp52g11  olsp52o16  olsp53m16  olsp55a05  olsp55c24  olsp57e05  olsp58a08  olsp58c13  olsp59l03  olsp5b19  olsp5e20  olsp5o16  olsp5p06  olsp60g24  olsp61n23  olsp62p24  olsp64d02  olsp64f14  olsp64j10  olsp64m20  olsp65m16  olsp7d01  olsp9b10  olsp9l03  olsp9l23  olsp9m24 
olte 2 cDNA [Download: FASTA]
olte55o23  olte57n04 
olova 4 cDNA [Download: FASTA]
olova22j23  olova2i07  olova34d08  olova36j23 

Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/


Contig information - 1
Name Contig1
Clone count 7 clones
Length 771
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit MHC class II alpha subunit [Stizostedion vitreum]
Score 798
Evalue 3.32827e-83
Detail
Sequence [Download: FASTA]
>Contig1
GAGTCTGAGTCTGAGAGGAGATGAAGATGAAGCTGCTGCTCTTCGTCTGCGGGATCCTCAGCGGG
ACGGCGGCAGTTTTTCATGAGGACTTAGCCATCACCGGCTGTTCAGACTCTGATGGAGAGGACAT
GTACGCTCTGGATGGAGAAGAGGTTTGGTACGCAGACTTCAAGAAGCAGACGGGAGTCGAGCCTC
AGCCTCCATTTGTGGATCATGTCAGTTACCCAGGAGGATATGAACAAGCTGTGGCCAATCAACAG
ATCTGCAGATCAAACCTGAAGATTAGTCGCATCGCCATGAAGGATCTTCCACTGGAACGAGACCC
CCCCTCCAACGTGGTGGTCTACAGCAGAGACGAGGTGGAGCTGGGGGAGCAGAACACCCTGATCT
GCCACGTCTCTGGGTTCTACCCGGCTCCGGTGAACGTGTCCTGGACCAAGAACGGTGAGAGGGTG
TCGGGCAGCATCAACATCCCCTTCCCCAGCAGTGACGGGACCTTCACCCAGATCTCCAGGCTGCC
CTTCGTTCCTCAGCTGGGGGACATCTACAGCTGCTCGGTGGAACATCCGGCTCTGACGGAGGTCC
AAACCAAGATCTGGGGTGAGGAGAGCTTCAGAGCGGCAGCTGCAGCTTTAGGCTCCGCCCTCATC
TTCCTCTTCCTCTCTGCAGATGTGGAGAAGACCCAGCCCGGCGTGGGACCCGCCGTCTTCTGTGG
AGTGGGTCTGGCGGTGGGCCTGCTGGGCGTGGCTGCAGGAACCTTCTTCCTCATCA

Contig information - 2
Name Contig2
Clone count 151 clones
Length 937
Assemble Result Assemble Viewer
Homology(BLAST)
Top Hit MHC class II alpha subunit [Stizostedion vitreum]
Score 812
Evalue 1.13178e-84
Detail
Sequence [Download: FASTA]
>Contig2
TGGACAAAATGAGTCTGAGTCTGAGAGGAGATGAAGATGAAGCTGCTGCTCTTCGTCTGCGGGAT
CCTCAGCGGGACGGCGGCAGTTTTTCATGAGGACTTAGCCATCACCGGCTGTTCAGACTCTGATG
GAGAGGACATGTACGCTCTGGATGGAGAAGAGGTTTGGTACGCAGACTTCAAGAAGCAGACGGGA
GTCGAGCCTCAGCCTCCATTTGTGGATCATGTCAGTTACCCAGGAGGATATGAACAAGCTGTGGC
CAATCAACAGATCTGCAGATCAAACCTGAAGATTAGTCGCATCGCCATGAAGGATCTTCCACTGG
AACGAGACCCCCCCTCCAACGTGGTGGTCTACAGCAGAGACGAGGTGGAGCTGGGGGAGCAGAAC
ACCCTGATCTGCCACGTCTCTGGGTTCTACCCGGCTCCGGTGAACGTGTCCTGGACCAAGAACGG
TGAGAGGGTGTCGGGCAGCATCAACATCCCCTTCCCCAGCAGTGACGGGACCTTCACCCAGATCT
CCAGGCTGCCCTTCGTTCCTCAGCTGGGGGACATCTACAGCTGCTCGGTGGAACATCCGGCTCTG
ACGGAGGTCCAAACCAAGATCTGGGATGTGGAGAAGACCCAGCCCGGCGTGGGACCCGCCGTCTT
CTGTGGAGTGGGTCTGGGCGGTGGGCCTGCTGGGGCGTGGCTGCAGGAAACCTTCTTCCTCATCA
AAGGAAACGAGTGCAGCTGATTGGAGGATGCTGATGATGTCATCGTGGCTGGAGATGGGGGGGGG
GGTGANAACGGGGATTTGAACCAACAACTGTTTCTGTAATAAAGGTTCTCTGATTTTCTGACTTC
CTGTTTTATTTTGAAAGTCTGTTCTGTTGATTTCCTCCATAAACCGATGATGTTCCTGTAATTAA
ATCTCTATTTAAAACCCAAAAAAAAAA
/medaka