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CLSTF00402
VD
| Merge cluster information | |||
|---|---|---|---|
| Name | CLSTF00402 | ||
| Library | ALL | 32 | cDNA [Download: FASTA] |
| olea | 0 cDNA | ||
| oleb | 1 |
cDNA [Download: FASTA] oleb42m07 |
|
| olec | 1 |
cDNA [Download: FASTA] olec12l23 |
|
| olvl | 5 |
cDNA [Download: FASTA] olvl24d14 olvl31j09 olvl37f09 olvl59k03 olvl5a21 |
|
| olli | 0 cDNA | ||
| olbr | 0 cDNA | ||
| olgi | 1 |
cDNA [Download: FASTA] olgi18m06 |
|
| olki | 1 |
cDNA [Download: FASTA] olki39m18 |
|
| olsp | 0 cDNA | ||
| olte | 16 |
cDNA [Download: FASTA] olte10b02 olte12b24 olte17m11 olte21i07 olte35f12 olte41b19 olte50l07 olte53o06 olte57j11 olte58a18 olte59l18 olte60g05 olte62o15 olte68j22 olte69k05 olte9l13 |
|
| olova | 7 |
cDNA [Download: FASTA] olova15i14 olova17m06 olova18d06 olova2m21 olova45p10 olova50d08 olova57g23 |
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Before using Assemble Viewer, please ensure that you have the latest version of Java. If you are not using the latest Java version, please download it here. http://java.com/ja/download/ |
| Contig information - 1 | |
|---|---|
| Name | Contig1 |
| Clone count | 1 clones |
| Length | 520 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] |
| Score | 95 |
| Evalue | 0.0427134 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig1 GAGAACCGGTTTGAAACTGGAGCCGGTTGGACTTCAGGACACAAAGCGGTTCCAAAGATCCAGAG GAAGAAGTCAAAGAAAGAACAGCTGCATTTGTGTCAGAGGGAACTCTTCGGCACGAGTTCTGACG AGGATCAGGGGGCGGGAACACATTACACCAATTTTAAAATGGCTGCATTGGCTGACTGAAAGCAA AAAGACTTTTTTGCTGCAGCAAACAAAGGTAAAGGTGGAAGATGTGTGTGAGCTGATGTGGATCC AGTGAATCCAGCAGCATGGATCAGGAGGGAGGCCCTCCCTCTAAAAGCAGAGATGGCCTCAGACT TATCTTCACTTTAGCCTTGGAGGTTCCCTCCAGCAGTAACCTGTGGGCGTGATTTTCACACGAGG TCCATCGGACGATCTTCTGAATATGCAAATGAAGGGTTTTTATACCAAAGCCCATCCCTGAGCTC GTTGGTTCGGACTTTGAATGTACCATGTTCATATGTCTGTCCCCTTCGTGTTTGTGCGAAGTAAA |
| Contig information - 2 | |
|---|---|
| Name | Contig2 |
| Clone count | 2 clones |
| Length | 693 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | ring finger and KH domain containing 2 [Mus musculus] |
| Score | 87 |
| Evalue | 0.760029 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig2 GGGTTCGGACTTTGAATGTACCATGTTCATCTGTCTGTCCCCTTCGTGTTTGTGCGAAGTAAAAC CTCCACAAAAGATAAGTAACTGTCTCTGAGTCATTATTCATTATTTCTGTGTGTAAGAAACTGAC GGGGTTACGAACTAAAATTTAATACAGTCCTTTCTAGAAAATCCAGTTTCCTCACATTTGGTCCT TCTGAGCCGGCCGACTGACGCCCTGGACATCGCTGGAACCCCTGGGGGGGGGTTGCCTGAAAACC GCGCGGTCTGATACCACGGTCTCAGCATTGACCCATCCGACTTCAGGATCGGTGACCCTGCCCCT GGATCCAGTGGTGCCCTCGGGGGCGTCGGACCCTCATCAAATAACGAGGTTCATTGCTATAAGTG AGTACGCCACACAGAAAGTCTGTCCTCTCTTTACTTGTTAGGGTCTTTGATTAATGCCTCGTTCT AAAACAAAATAGTGACTCAGTTGACAAATAATTAGGTTTCTTTTCTGGTTCTCCAAGCTTTTTCT ACTGATTANATTCAGCGCTGGAGAATCCATAAAACGGGTTACTTGGGTGGGAACTCTGGTTTGTG ATTGAAATTGAGAACGTTTGTAGCTGATCGTCGATCAAAAAAACCTCAAAAAGATGGGTGGGACT CATTCACAAAATCTAACAAAGACAGTAAGAAAGCACATTGATC |
| Contig information - 3 | |
|---|---|
| Name | Contig3 |
| Clone count | 3 clones |
| Length | 861 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | reverse transcriptase-like protein [Paralichthys olivaceus] |
| Score | 210 |
| Evalue | 6.24064e-15 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig3 GGAGACCATGTCCTTCTGTCCAAAGTCCACAGGAATCTGCTTCCTGGCTGCATTCAGAACCGGTT TGAAACTGGAGCCGGTTGGACTTCAGGACACAAAGCGGTTCCAAAGATCCAGAGGAAGAAGTCAA AGAAAGAACAGCTGCATTTGTGTCAGAGGGGTGAGTTGATGAACAGCTGGGATGGAAAGAATGTG GATGTTTGCATTTCACAGGCTTTCAGAAGAAGTTCTTGAATGTTAGGATCAGCTGGGAGCCTCTT TGTTGGAATCTAAAGAATCCTGGCTGAGATCAGATCAGATTGATCCAACATTAGTTTGGATTTCT GGATCATGAAGTGATTAAAGGATTTGGAGGAGTTGAAAGGAGGATCAATCATCTGAACTTCAGCT TTATCATCCCATTTTAACTGGTTGTGATTTTTCTTTTTGGATGGCAGAAAACTTCCTACAGCTCA ACTAGGACAAACCTAAAATTGTAATTATCGGTTCTGAAGACAAGAGAGAGATTATTTTACCACAT CTTAAGAACTTCAAACTTTCTCCATGTGTGAGAAACCTGGGCCTACTTTTTGACTGAGTAAATTT TATTCCACACATTAAAAATGTGTAAAGATTTTATCACCTTATGCCAGAGTCCACCCATTCCTCTC TCTTGCCAGCACAGAGGTGCTGATGTTTGCTTTTATCTTCAGTCGTTTAGATTATTGTAATGCCC TGATTTCTGGTTTACCCAAAGAGTTTACAATTTCTACAGAACTCTTCGGCACGAGTTCTGACGAG GATCAGGGGGCGGGAACACATTACACCAATTTTAAAATGGCTGCATTGGCTGACTGAAAGCAAAA AGACTTTTTTGCTGCA |
| Contig information - 4 | |
|---|---|
| Name | Contig4 |
| Clone count | 5 clones |
| Length | 713 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | pol protein [Recombinant M-MuLV/RaLV retrovirus] |
| Score | 127 |
| Evalue | 1.85404e-05 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig4 GGGTTCGGACTTTGAATGTACCATGTTCATGTCTGTCCCCTTCGTGTTTGTGCGAAGTAAAACCT CCACAAAAGCTAAGTTACTGTCTCTGAGTCATTATTCATTATTTCTGTGTGTAAGAAACTGACGG GGTAACGAACCTAAAAATATTCCTATTTTACAGTCCTTTCTAGAAAATCCAGTTTCTTCACATTT GGTCCTTCTGAGCCGGCCGGCGCGCGCCCTGGACATCGCTGGAGCCCCTGGGGGGGGTTGCCTGA AAACCGCTAGCGGTCTGAGATCACAGCCTCAGCATTGACCAATCCGCCTTCAGGATCGGCGGCCC TCGCCCTTGGGTCCGGTGGTGCCCCCGGTGACGTCGGACCCTCATCAAATAGCGACGTTCATTGC TTGAAACTCTGCATCCTGACCAGAAGGCCTCTGTCGGTGACCTGCTTTACCCTGAAGACCATTTA ACGGACTGATTGGTCACACCCAGGTGGACAGGCCCCTACAAGGTTCTCCTCACCATGCCACCTAC AGTACACATTGCTGAACGACCCTCCTGGATTCACGTAAGCCACTGTAAATTGCTGAGAGCCTATG AGACTGACATTTTGAGACGCATCCCTGGTTGAAGTCCAACTACGAAGCCGCCGCAGTGTGACACT ACTCTTGGCGAGGGGCGCTCCCTGGTGTGTTTCCTCTAGCGCTGCTCTCTTCCAGCTACAGTG |
| Contig information - 5 | |
|---|---|
| Name | Contig5 |
| Clone count | 10 clones |
| Length | 351 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress [Acidithiobacillus caldus ATCC 51756] |
| Score | 79 |
| Evalue | 2.64735 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig5 GGGTTCGGACTTTGAATGTACCATGTACTTCTGTCTGTCCCCTTCGTGTTTGTGCGAAGTAAAAC CTCCACAAAAGCTAAGTAACTGTCTCTGAGTCATTATTCATTATTTCTGTGTGCTGGAAACTGAC GGGGTAACGAACTAAAATTTTATACAGTCCTTTCTAGAAAATCCAGTTTCCTCACATTTGGTCCT TTCGAGCTGGCCGGCGCGCGCCCTGGACATCGCTGGAACCCCTGGGGGGGGGGGNTGCCCGAAAA CCATGCATGGGCTGANATCACAGTCTCAGTATTGACACATCCGCCTTCAGGATCANCGGCCCTCG CCCTTTGGATCCGGCGATGCCCCCGA |
| Contig information - 6 | |
|---|---|
| Name | Contig6 |
| Clone count | 11 clones |
| Length | 1111 |
| Assemble Result | Assemble Viewer |
| Homology(BLAST) | |
| Top Hit | PREDICTED: similar to gag-pro-pol polyprotein [Danio rerio] |
| Score | 137 |
| Evalue | 2.75553e-06 |
| Detail |
|
| Sequence |
[Download: FASTA] >Contig6 GAGACCATGTCCTTCTGTCCAAAGTCCACAGGAATCTGCTTCCTGGCTGCATTCAGAACCGGTTT GAAACTGGAGCCGGTTGGACTTCAGGACACAAAGCGGTTCCAAAGATCCAGAGGAAGAAGTCAAA GAAAGAACAGCTGCATTTGTGTCAGAGGGGTAAAGGTGGAAGATGTGTGTGAGCTGATGTGGATC CAGTGAATCCAGCAGCATGGATCAGGAGGGAGGCCCTCCCTCTAAAAGCAGAGATGGCCTCAGAC TTATCTTCACTTTAGCCTTGGAGGTTCCCTCCAGCAGTAACCTGTGGGCGTGATTTTCACACGAG GTCCATCGGACGATCTTCTGAATATGCAAATGAAGGGTTTTTATACCAAAGCCCATCCCTGAGCT CGTTGGTTCGGACTTTGAATGTACCATGTTCATATGTCTGTCCCCTTCGTGTTTGTGCGAAGTAA AACCTCCACAAAAGATAAGTAACTGTCTCTGAGTCATTATTCATTATTCATTATTTCTGTGTGTA AGAAACTGACGGGGTTACGAACTAAAATTTAATACAGTCCTTTCTAGAAAATCCAGTTTCCTCAC ATTTGGTCCTTCTGAGCCGGCCGACTGACGCCCTGGACATCGCTGGAACCCCTGGGGGGGGGTTG CCTGAAAACCGCGCGGTCTGATACCACGGTCTCAGCATTGACCCATCCGACTTCAGGATCGGTGA CCCTGCCCCTGGATCCAGTGGTGCCCTCGGGGGCGTCGGACCCTCATCAAATAACGAGGTTCATT GCTATAAACTCTGCATCCCGACCAGAAGGCCTCTGTCGGTGACCTGCTTTACTCGAAGGCCATTC AACGGACTGATTGGTCACACCCGAGGTGGACGGGACCCTTCAAGGTTCTCCTCACCATGCCACCT ACAGTACACATTGCTGAACGACCATCCTGGATTCACGTAAGCCACTGTAAATTGCTGAGAGCCTA CGAGACTGACATTTTGAGACGCATCCCTGGTTGAAGTCCAACTACGAAGCCGCCCCAGTGTGACA CTGCTCCTGGCGAGAGGAGCGTTCCCTGGTGTGTTTCCTCTAGCGCTGCTCTCTTCCAGCTACAG TGAGCT |
