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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
8309R-1 |
| Symbol |
Tango7 |
Full Name |
Transport and Golgi organization 7 |
| CG No |
CG8309 |
Old CG No |
CG8309 |
| Synonyms |
CG8309, TANGO7, anon-EST:Posey67, anon-EST:Posey76, Tango7 |
| Accession No (Link to NCBI) |
NM_137088.3 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Ohhara Y, Nakamura A, Kato Y, Yamakawa-Kobayashi K.
Chaperonin TRiC/CCT supports mitotic exit and entry into endocycle in Drosophila.
PLoS Genet (2019) 15(4) e1008121
[
PubMed ID = 31034473
]
[
RRC reference
]
Hosono C, Matsuda R, Adryan B, Samakovlis C.
Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes.
Nat Cell Biol (2015) 17(12) 1569-76
[
PubMed ID = 26551273
]
[
RRC reference
]
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Marinho J, Martins T, Neto M, Casares F, Pereira PS.
The nucleolar protein Viriato/Nol12 is required for the growth and differentiation progression activities of the Dpp pathway during Drosophila eye development.
Dev Biol (2013) 377(1) 154-65
[
PubMed ID = 23416177
]
[
RRC reference
]
Yano H, Yamamoto-Hino M, Awano W, Aoki-Kinoshita KF, Tsuda-Sakurai K, Okano H, Goto S.
Identification of proteasome components required for apical localization of Chaoptin using functional genomics.
J Neurogenet (2012) 26(1) 53-63
[
PubMed ID = 22417167
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T.
RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc.
Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
Chew SK, Chen P, Link N, Galindo KA, Pogue K, Abrams JM.
Genome-wide silencing in Drosophila captures conserved apoptotic effectors.
Nature (2009) 460(7251) 123-7
[
PubMed ID = 19483676
]
[
RRC reference
]
Saj A, Arziman Z, Stempfle D, van Belle W, Sauder U, Horn T, Dürrenberger M, Paro R, Boutros M, Merdes G.
A combined ex vivo and in vivo RNAi screen for notch regulators in Drosophila reveals an extensive notch interaction network.
Dev Cell (2010) 18(5) 862-76
[
PubMed ID = 20493818
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgATGACTTCGCATCCGGTTTTC |
| Primer Seq. 3' |
aatctagaggtaccTACAGCTTCTGCATCTGTTCC |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 ATGACTTCGC ATCCGGTTTT CATAGACCTG TCCCTGGACG AGCAGGTGCA AGAGCTGCGC
0061 AAGTATTTCA AGAAGCTGGG AGCCGAAATC TCATCGGAGA AGTCCAATAA AGGTGTGGAG
0121 GATGATTTGC ACAAGATCAT TCGGCGTCTG CGACGTTTGC TTTAAGGATG GTGAGCCCTC
0181 GCAGATTGAT GGCATTCTGA ACAGCATTGT GTCCATCATG ATCACGATAC CCCTGGATCG
0241 CGGTGAGAAC ATTGTCCTGG CCTACTGCGA GAAGATGACC AAGGCTCCCA ATCTTCCATT
0301 GGGCAAGGTG TGCCTTCAGT CGTTGTGGCG TCTGTTCAAC AACCTGGACA CCGCCTCTCC
0361 CTTACGCTAC CATGTGTACT ACCACCTGGT CCAGGTGGCC AAGCAGTGCG AACAGGTGCT
0421 AGGAGGTCTT CTCAGGTGTG GATCAGCTCA AATCCCAGTT TGCCAACTGC CCACCTTCGT
0481 CGGAACAGAT GCAGAAGCTG TA |
| in silico PCR Fragment |
0001 ATGACTTCGC ATCCGGTTTT CATAGACCTG TCCCTGGACG AGCAGGTGCA AGAGCTGCGC
0061 AAGTATTTCA AGAAGCTGGG AGCCGAAATC TCATCGGAGA AGTCCAATAA AGGTGTGGAG
0121 GATGATTTGC ACAAGATCA- TCGGCGTCTG CGACGTTTGC TTTAAGGATG GTGAGCCCTC
0181 GCAGATTGAT GGAATTCTAA ACAGCATTGT GTCCATCATG ATCACGATAC CCCTGGATCG
0241 CGGTGAGAAC ATTGTCCTGG CCTACTGCGA GAAGATGACC AAGGCTCCCA ATCTTCCATT
0301 GGGCAAGGTG TGCCTTCAGT CGTTGTGGCG TCTGTTCAAC AACCTGGACA CCGCCTCTCC
0361 CTTACGCTAC CATGTGTACT ACCACCTGGT CCAGGTGGCC AAGCAGTGCG AACAGGTGCT
0421 -GGAGGTCTT CTCAGGTGTG GATCAGCTCA AATCCCAGTT TGCCAACTGC CCACCTTCGT
0481 CGGAACAGAT GCAGAAGCTG TA |
| Assemble Data |
8309R-1.IR_full 1 ATGACTTCGCATCCGGTTTTCATAGACCTGTCCCTGGACGAGCAGGTGCAAGAGCTGCGC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 1 ATGACTTCGCATCCGGTTTTCATAGACCTGTCCCTGGACGAGCAGGTGCAAGAGCTGCGC 60
8309R-1.IR_full 61 AAGTATTTCAAGAAGCTGGGAGCCGAAATCTCATCGGAGAAGTCCAATAAAGGTGTGGAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 61 AAGTATTTCAAGAAGCTGGGAGCCGAAATCTCATCGGAGAAGTCCAATAAAGGTGTGGAG 120
8309R-1.IR_full 121 GATGATTTGCACAAGATCATTCGGCGTCTGCGACGTTTGCTTTAAGGATGGTGAGCCCTC 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 121 GATGATTTGCACAAGATCA-TCGGCGTCTGCGACGTTTGCTTTAAGGATGGTGAGCCCTC 180
8309R-1.IR_full 181 GCAGATTGATGGCATTCTGAACAGCATTGTGTCCATCATGATCACGATACCCCTGGATCG 240
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 181 GCAGATTGATGGAATTCTAAACAGCATTGTGTCCATCATGATCACGATACCCCTGGATCG 240
8309R-1.IR_full 241 CGGTGAGAACATTGTCCTGGCCTACTGCGAGAAGATGACCAAGGCTCCCAATCTTCCATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 241 CGGTGAGAACATTGTCCTGGCCTACTGCGAGAAGATGACCAAGGCTCCCAATCTTCCATT 300
8309R-1.IR_full 301 GGGCAAGGTGTGCCTTCAGTCGTTGTGGCGTCTGTTCAACAACCTGGACACCGCCTCTCC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 301 GGGCAAGGTGTGCCTTCAGTCGTTGTGGCGTCTGTTCAACAACCTGGACACCGCCTCTCC 360
8309R-1.IR_full 361 CTTACGCTACCATGTGTACTACCACCTGGTCCAGGTGGCCAAGCAGTGCGAACAGGTGCT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 361 CTTACGCTACCATGTGTACTACCACCTGGTCCAGGTGGCCAAGCAGTGCGAACAGGTGCT 420
8309R-1.IR_full 421 AGGAGGTCTTCTCAGGTGTGGATCAGCTCAAATCCCAGTTTGCCAACTGCCCACCTTCGT 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8309R-1.in silico 421 -GGAGGTCTTCTCAGGTGTGGATCAGCTCAAATCCCAGTTTGCCAACTGCCCACCTTCGT 480
8309R-1.IR_full 481 CGGAACAGATGCAGAAGCTGTA 502
||||||||||||||||||||||
8309R-1.in silico 481 CGGAACAGATGCAGAAGCTGTA 502
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
482 |
0 |
0 |
3 |
NM_137088.3 |
CG8309-RA (Tango7), mRNA |
| 0 |
0 |
6 |
4 |
4 |
NM_141408.3 |
CG1137-RA (CG1137), mRNA |
| 0 |
0 |
2 |
3 |
3 |
NM_143098.2 |
CG13664-RA (Cad96Cb), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_135011.2 |
CG15631-RA (CG15631), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_057266.4 |
CG4162-RA (lace), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_205927.1 |
CG8222-RD, transcript variant D (Pvr), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_175983.1 |
CG8222-RC, transcript variant C (Pvr), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_205926.1 |
CG8222-RE, transcript variant E (Pvr), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_205925.1 |
CG8222-RF, transcript variant F (Pvr), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_078785.2 |
CG8222-RA, transcript variant A (Pvr), mRNA |
| 0 |
0 |
1 |
7 |
3 |
NM_164801.1 |
CG8222-RB, transcript variant B (Pvr), mRNA |
| 0 |
0 |
1 |
6 |
2 |
NM_079620.2 |
CG9792-RA (yellow-e), mRNA |
| 0 |
0 |
1 |
5 |
2 |
NM_169112.1 |
CG10981-RB, transcript variant B (CG10981), mRNA |
| 0 |
0 |
1 |
5 |
2 |
NM_141339.2 |
CG10981-RA, transcript variant A (CG10981), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_135134.2 |
CG9092-RA (Gal), mRNA |
| 0 |
0 |
1 |
3 |
8 |
NM_141799.1 |
CG17187-RA (CG17187), mRNA |
| 0 |
0 |
1 |
3 |
5 |
NM_001038727.1 |
CG4293-RD, transcript variant D (CG4293), mRNA |
| 0 |
0 |
1 |
3 |
5 |
NM_001038728.1 |
CG4293-RC, transcript variant C (CG4293), mRNA |
| 0 |
0 |
1 |
3 |
5 |
NM_130491.3 |
CG4293-RA, transcript variant A (CG4293), mRNA |
| 0 |
0 |
1 |
3 |
5 |
NM_166847.2 |
CG4293-RB, transcript variant B (CG4293), mRNA |
| 0 |
0 |
1 |
3 |
3 |
NM_135905.2 |
CG15260-RA (CG15260), mRNA |
| 0 |
0 |
1 |
2 |
4 |
NM_206101.1 |
CG13168-RC, transcript variant C (CG13168), mRNA |
| 0 |
0 |
1 |
2 |
4 |
NM_206100.1 |
CG13168-RB, transcript variant B (CG13168), mRNA |
| 0 |
0 |
1 |
2 |
4 |
NM_001043270.1 |
CG5621-RB, transcript variant B (CG5621), mRNA |
| 0 |
0 |
1 |
2 |
4 |
NM_142670.2 |
CG5621-RA, transcript variant A (CG5621), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_136381.1 |
CG15909-RA (CG15909), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_080307.1 |
CG3206-RA (Or2a), mRNA |
| 0 |
0 |
0 |
6 |
7 |
NM_136839.2 |
CG30023-RA (sprt), mRNA |
| 0 |
0 |
0 |
6 |
4 |
NM_079486.3 |
CG7478-RA (Act79B), mRNA |
| 0 |
0 |
0 |
5 |
12 |
NM_080109.2 |
CG3001-RA, transcript variant A (Hex-A), mRNA |
|
| Wing Disc |
GFP
 |
Puc
 |
Caspase
 |
DAPI
 |
Merge
 |
Figure
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|
JNK signal
|
Caspase-3 signal
|
| Dcompartment |
|
Penetrance |
| ++ |
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