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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
7776R-1 |
Symbol |
E(Pc) |
Full Name |
Enhancer of Polycomb |
CG No |
CG7776 |
Old CG No |
CG7776 |
Synonyms |
CG7776, GH05739, GH14582, e(Pc), III, l(2)28-28-12, anon-48Ac, E(Pc) |
Accession No (Link to NCBI) |
NM_078974.2 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Ohhara Y, Hoshino G, Imahori K, Matsuyuki T, Yamakawa-Kobayashi K. The Nutrient-Responsive Molecular Chaperone Hsp90 Supports Growth and Development in Drosophila. Front Physiol (2021) 12 690564
[
PubMed ID = 34239451
]
[
RRC reference
]
Owusu-Ansah E, Banerjee U. Reactive oxygen species prime Drosophila haematopoietic progenitors for differentiation. Nature (2009) 461(7263) 537-41
[
PubMed ID = 19727075
]
[
RRC reference
]
Saj A, Arziman Z, Stempfle D, van Belle W, Sauder U, Horn T, Dürrenberger M, Paro R, Boutros M, Merdes G. A combined ex vivo and in vivo RNAi screen for notch regulators in Drosophila reveals an extensive notch interaction network. Dev Cell (2010) 18(5) 862-76
[
PubMed ID = 20493818
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCATTTGGATCCGTCCAAGCAG |
Primer Seq. 3' |
aatctagaggtaccATCTTGAGGCGTTTGTTCAGC |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 CATTTGGATC CGTCCAAGCA GATGCCCATC TACTTGGCGG AGGAGCTGCC CGACCTCCCC
0061 GAGTACTCAG CCATCAACCG GGCAGTGcCT CAAATGCCCA GTGGCATGGA GAAGGAGGAG
0121 GAGTCGGAGC ACCACTTGCA GCGAGCGATA TGCACGGGTC TGATCATCCC CCACGCCCGA
0181 GGTGCTGCAG ACGGATCAGC CCTTCTACGA TGCCTACTAT CCGCCGGACT ACAAAATGCC
0241 CCGCCAAATG ATCCACATGC AACCTCTTGG GCTGGATACC GAGGTCCCTG ACTACGACAT
0301 GGACAGTGCC GATGAGGACT GGCTCAGTCA GCAGCAGCGC CTGGAGCTTA CCGAACTCAA
0361 GTTCGAGCAG ATGATGGACC GGCTAGAAAA GAGCTCCGGC CAAACGGTGG TCACGCTGAA
0421 CGAGGCCAAG TCGCTGCTTA ACCAGGACGA CGAGACCAGC ATATCCGTCT ACGATTACTG
0481 GCTGAACAAA CGCCTCAAGA T |
in silico PCR Fragment |
0001 CATTTGGATC CGTCCAAGCA GATGCCCATC TACTTGGCGG AGGAGCTGCC CGACCTCCCC
0061 GAGTACTCAG CCATCAACCG GGCAGTGCCT CAAATGCCCA GTGGCATGGA GAAGGAGGAG
0121 GAGTCGGAGC ACCACTTGCA GCGAGCGATA TGCACGGGTC TGATCAT-CC CCACGCCCGA
0181 GGTGCTGCAG ACGGATCAGC CCTTCTACGA TGCCTACTAT CCGCCGGACT ACAAAATGCC
0241 CCGCCAAATG ATCCACATGC AACCTCTTGG GCTGGATACC GAGGTCCCTG ACTACGACAT
0301 GGACAGTGCC GATGAGGACT GGCTCAGTCA GCAGCAGCGC CTGGAGCTTA CCGAACTCAA
0361 GTTCGAGCAG ATGATGGACC GGCTAGAAAA GAGCTCCGGC CAAACGGTGG TCACGCTGAA
0421 CGAGGCCAAG TCGCTGCTTA ACCAGGACGA CGAGACCAGC ATATCCGTCT ACGATTACTG
0481 GCTGAACAAA CGCCTCAAGA T |
Assemble Data |
7776R-1.IR_full 1 CATTTGGATCCGTCCAAGCAGATGCCCATCTACTTGGCGGAGGAGCTGCCCGACCTCCCC 60
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7776R-1.in silico 1 CATTTGGATCCGTCCAAGCAGATGCCCATCTACTTGGCGGAGGAGCTGCCCGACCTCCCC 60
7776R-1.IR_full 61 GAGTACTCAGCCATCAACCGGGCAGTGCCTCAAATGCCCAGTGGCATGGAGAAGGAGGAG 120
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7776R-1.in silico 61 GAGTACTCAGCCATCAACCGGGCAGTGCCTCAAATGCCCAGTGGCATGGAGAAGGAGGAG 120
7776R-1.IR_full 121 GAGTCGGAGCACCACTTGCAGCGAGCGATATGCACGGGTCTGATCATCCCCCACGCCCGA 180
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7776R-1.in silico 121 GAGTCGGAGCACCACTTGCAGCGAGCGATATGCACGGGTCTGATCAT-CCCCACGCCCGA 180
7776R-1.IR_full 181 GGTGCTGCAGACGGATCAGCCCTTCTACGATGCCTACTATCCGCCGGACTACAAAATGCC 240
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7776R-1.in silico 181 GGTGCTGCAGACGGATCAGCCCTTCTACGATGCCTACTATCCGCCGGACTACAAAATGCC 240
7776R-1.IR_full 241 CCGCCAAATGATCCACATGCAACCTCTTGGGCTGGATACCGAGGTCCCTGACTACGACAT 300
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7776R-1.in silico 241 CCGCCAAATGATCCACATGCAACCTCTTGGGCTGGATACCGAGGTCCCTGACTACGACAT 300
7776R-1.IR_full 301 GGACAGTGCCGATGAGGACTGGCTCAGTCAGCAGCAGCGCCTGGAGCTTACCGAACTCAA 360
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7776R-1.in silico 301 GGACAGTGCCGATGAGGACTGGCTCAGTCAGCAGCAGCGCCTGGAGCTTACCGAACTCAA 360
7776R-1.IR_full 361 GTTCGAGCAGATGATGGACCGGCTAGAAAAGAGCTCCGGCCAAACGGTGGTCACGCTGAA 420
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7776R-1.in silico 361 GTTCGAGCAGATGATGGACCGGCTAGAAAAGAGCTCCGGCCAAACGGTGGTCACGCTGAA 420
7776R-1.IR_full 421 CGAGGCCAAGTCGCTGCTTAACCAGGACGACGAGACCAGCATATCCGTCTACGATTACTG 480
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7776R-1.in silico 421 CGAGGCCAAGTCGCTGCTTAACCAGGACGACGAGACCAGCATATCCGTCTACGATTACTG 480
7776R-1.IR_full 481 GCTGAACAAACGCCTCAAGAT 501
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7776R-1.in silico 481 GCTGAACAAACGCCTCAAGAT 501
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
0 |
NM_078974.2 |
CG7776-RA, transcript variant A (E(Pc)), mRNA |
100 |
482 |
0 |
0 |
0 |
NM_165836.1 |
CG7776-RB, transcript variant B (E(Pc)), mRNA |
0.2 |
1 |
2 |
3 |
2 |
NM_057313.3 |
CG3736-RA (okr), mRNA |
0 |
0 |
5 |
2 |
7 |
NM_001042804.1 |
CG2174-RB, transcript variant B (Myo10A), mRNA |
0 |
0 |
5 |
2 |
7 |
NM_132441.1 |
CG2174-RA, transcript variant A (Myo10A), mRNA |
0 |
0 |
3 |
3 |
3 |
NM_165009.1 |
CG31763-RA (CG31763), mRNA |
0 |
0 |
3 |
2 |
6 |
NM_164448.1 |
CG4244-RA, transcript variant A (Su(dx)), mRNA |
0 |
0 |
3 |
2 |
4 |
NM_132614.2 |
CG4396-RA (fne), mRNA |
0 |
0 |
3 |
2 |
4 |
NM_164449.1 |
CG4244-RC, transcript variant C (Su(dx)), mRNA |
0 |
0 |
3 |
2 |
4 |
NM_057405.2 |
CG4244-RB, transcript variant B (Su(dx)), mRNA |
0 |
0 |
2 |
9 |
4 |
NM_058136.3 |
CG4376-RA, transcript variant A (Actn), mRNA |
0 |
0 |
2 |
9 |
4 |
NM_166920.1 |
CG4376-RB, transcript variant B (Actn), mRNA |
0 |
0 |
2 |
9 |
4 |
NM_058137.3 |
CG4376-RC, transcript variant C (Actn), mRNA |
0 |
0 |
2 |
4 |
2 |
NM_176133.3 |
CG12052-RI, transcript variant I (lola), mRNA |
0 |
0 |
2 |
2 |
18 |
NM_134510.1 |
CG12703-RA (CG12703), mRNA |
0 |
0 |
2 |
2 |
6 |
NM_079067.2 |
CG11949-RA, transcript variant A (cora), mRNA |
0 |
0 |
2 |
2 |
5 |
NM_132967.1 |
CG5004-RA (CG5004), mRNA |
0 |
0 |
2 |
2 |
4 |
NM_144290.1 |
CG12643-RA (CG12643), mRNA |
0 |
0 |
2 |
2 |
2 |
NM_142993.2 |
CG17785-RA (Golgin84), mRNA |
0 |
0 |
2 |
2 |
2 |
NM_079237.1 |
CG4321-RA (Cyp4d8), mRNA |
0 |
0 |
1 |
7 |
2 |
NM_057282.3 |
CG4087-RA (RpLP1), mRNA |
0 |
0 |
1 |
4 |
4 |
NM_170189.1 |
CG31115-RA (CG31115), mRNA |
0 |
0 |
1 |
4 |
2 |
NM_079073.1 |
CG8595-RA (Toll-7), mRNA |
0 |
0 |
1 |
3 |
13 |
NM_167872.1 |
CG9155-RC, transcript variant C (Myo61F), mRNA |
0 |
0 |
1 |
3 |
13 |
NM_057586.3 |
CG9155-RD, transcript variant D (Myo61F), mRNA |
0 |
0 |
1 |
3 |
13 |
NM_167871.1 |
CG9155-RB, transcript variant B (Myo61F), mRNA |
0 |
0 |
1 |
3 |
13 |
NM_167870.1 |
CG9155-RA, transcript variant A (Myo61F), mRNA |
0 |
0 |
1 |
3 |
8 |
NM_001038734.1 |
CG16902-RC (Hr4), mRNA |
0 |
0 |
1 |
3 |
4 |
NM_079610.2 |
CG12358-RA (Paip2), mRNA |
0 |
0 |
1 |
3 |
4 |
NM_140522.1 |
CG16979-RA (CG16979), mRNA |
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