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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
3523R-2 |
| Symbol |
CG3523 |
Full Name |
CG3523 |
| CG No |
CG3523 |
Old CG No |
CG3523 |
| Synonyms |
Fatty acid synthase, BcDNA:gh07626, DM_7295848, BcDNA:GH07626, anon-EST:Posey43, anon-EST:Posey235, anon-WO0138581.1, CG3523 |
| Accession No (Link to NCBI) |
NM_134904.2 |
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
| Map Viewer |
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Reference
[Please submit your publication]
|
Ohhara Y, Hoshino G, Imahori K, Matsuyuki T, Yamakawa-Kobayashi K.
The Nutrient-Responsive Molecular Chaperone Hsp90 Supports Growth and Development in Drosophila.
Front Physiol (2021) 12 690564
[
PubMed ID = 34239451
]
[
RRC reference
]
Chew SK, Chen P, Link N, Galindo KA, Pogue K, Abrams JM.
Genome-wide silencing in Drosophila captures conserved apoptotic effectors.
Nature (2009) 460(7251) 123-7
[
PubMed ID = 19483676
]
[
RRC reference
]
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| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCGATTCGCCGAGGAAGTCATC |
| Primer Seq. 3' |
aatctagaggtaccTCAAGCCGTAGCCGTTAACCC |
| Predicted Fragment Size |
502 |
| IR fragment full Seq |
0001 CGATTCGCCG AGGAAGTCAT CACCGCTGAG CCCGCACAAC GTGCCGCCCC CCAATTGGAC
0061 CTGGGTGGTG GTCACTATGT GCCCCGTCAG CAGCACCTCA ACGATGAGAT CGCCATCACC
0121 GGTTTCTCCG GCCGTCTGCC GGAGAGCTCC ACCATCGAGG AGTTCAAGCA GAATCTTTTC
0181 GACGGCGTCG ACATGGTCAA CGATGATCCC CGCCGTTGGG AGCGTGGTCT GTATGGACTT
0241 CCCGACAGGA TTGGCAAGCT CAAGGATAGC GATCTGGAGA ACTTTGACCA ACAGTTCTTC
0301 GGTGTGCACC AAAAGCAGGC TGAGTGCATG GACCCACTGC TGCGCATGCT GCTTCGAGCT
0361 CACCCATGAA GCTATTATTG ACGCTGGCCT AAACCCAAGT GATCTGCGCG GTTCCCGCAC
0421 TGGTGTGTAC ATCGGTGTGT CCAACTCGGA GACTGAGCAG CACTGGTGCA GCGATGCTGA
0481 CCGGGTTAAC GGCTACGGCT TGA |
| in silico PCR Fragment |
0001 CGATTCGCCG AGGAAGTCAT CACCGCTGAG CCCGCACAAC GTGCCGCCCC CCAATTGGAC
0061 CTGGGTGGTG GTCACTATGT GCCCCGTCAG CAGCACCTCA ACGATGAGAT CGCCATCACC
0121 GGTTTCTCCG GCCGTCTGCC GGAGAGCTCC ACCATCGAGG AGTTCAAGCA GAATCTTTTC
0181 GACGGCGTCG ACATGGTCAA CGATGATCCC CGCCGTTGGG AGCGTGGTCT GTATGGACTT
0241 CCCGACAGGA TTGGCAAGCT CAAGGATAGC GATCTGGAGA ACTTTGACCA ACAGTTCTTC
0301 GGTGTGCACC AAAAGCAGGC TGAGTGCATG GACCCACTGC TGCGCATGCT GC-TCGAGCT
0361 CACCCATGAA GCTATTATTG ACGCTGGCCT AAACCCAAGT GATCTGCGCG GTTCCCGCAC
0421 TGGTGTGTAC ATCGGTGTGT CCAACTCGGA GACTGAGCAG CACTGGTGCA GCGATGCTGA
0481 CCGGGTTAAC GGCTACGGCT TGA |
| Assemble Data |
3523R-2.IR_full 1 CGATTCGCCGAGGAAGTCATCACCGCTGAGCCCGCACAACGTGCCGCCCCCCAATTGGAC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 1 CGATTCGCCGAGGAAGTCATCACCGCTGAGCCCGCACAACGTGCCGCCCCCCAATTGGAC 60
3523R-2.IR_full 61 CTGGGTGGTGGTCACTATGTGCCCCGTCAGCAGCACCTCAACGATGAGATCGCCATCACC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 61 CTGGGTGGTGGTCACTATGTGCCCCGTCAGCAGCACCTCAACGATGAGATCGCCATCACC 120
3523R-2.IR_full 121 GGTTTCTCCGGCCGTCTGCCGGAGAGCTCCACCATCGAGGAGTTCAAGCAGAATCTTTTC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 121 GGTTTCTCCGGCCGTCTGCCGGAGAGCTCCACCATCGAGGAGTTCAAGCAGAATCTTTTC 180
3523R-2.IR_full 181 GACGGCGTCGACATGGTCAACGATGATCCCCGCCGTTGGGAGCGTGGTCTGTATGGACTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 181 GACGGCGTCGACATGGTCAACGATGATCCCCGCCGTTGGGAGCGTGGTCTGTATGGACTT 240
3523R-2.IR_full 241 CCCGACAGGATTGGCAAGCTCAAGGATAGCGATCTGGAGAACTTTGACCAACAGTTCTTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 241 CCCGACAGGATTGGCAAGCTCAAGGATAGCGATCTGGAGAACTTTGACCAACAGTTCTTC 300
3523R-2.IR_full 301 GGTGTGCACCAAAAGCAGGCTGAGTGCATGGACCCACTGCTGCGCATGCTGCTTCGAGCT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
3523R-2.in silico 301 GGTGTGCACCAAAAGCAGGCTGAGTGCATGGACCCACTGCTGCGCATGCTGC-TCGAGCT 360
3523R-2.IR_full 361 CACCCATGAAGCTATTATTGACGCTGGCCTAAACCCAAGTGATCTGCGCGGTTCCCGCAC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 361 CACCCATGAAGCTATTATTGACGCTGGCCTAAACCCAAGTGATCTGCGCGGTTCCCGCAC 420
3523R-2.IR_full 421 TGGTGTGTACATCGGTGTGTCCAACTCGGAGACTGAGCAGCACTGGTGCAGCGATGCTGA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3523R-2.in silico 421 TGGTGTGTACATCGGTGTGTCCAACTCGGAGACTGAGCAGCACTGGTGCAGCGATGCTGA 480
3523R-2.IR_full 481 CCGGGTTAACGGCTACGGCTTGA 503
|||||||||||||||||||||||
3523R-2.in silico 481 CCGGGTTAACGGCTACGGCTTGA 503
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
484 |
0 |
0 |
3 |
NM_134904.2 |
CG3523-RA (CG3523), mRNA |
| 0.2 |
1 |
2 |
3 |
2 |
NM_167565.1 |
CG8649-RD, transcript variant D (Fim), mRNA |
| 0 |
0 |
5 |
4 |
2 |
NM_140730.2 |
CG13732-RA (CG13732), mRNA |
| 0 |
0 |
3 |
3 |
2 |
NM_058041.2 |
CG12467-RA (CG12467), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_167961.1 |
CG1244-RE, transcript variant E (CG1244), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_167962.1 |
CG1244-RF, transcript variant F (CG1244), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_167960.1 |
CG1244-RD, transcript variant D (CG1244), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_167958.1 |
CG1244-RB, transcript variant B (CG1244), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_139476.1 |
CG1244-RA, transcript variant A (CG1244), mRNA |
| 0 |
0 |
3 |
2 |
3 |
NM_167959.1 |
CG1244-RC, transcript variant C (CG1244), mRNA |
| 0 |
0 |
2 |
2 |
9 |
NM_142445.1 |
CG7146-RA (CG7146), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_001043251.1 |
CG31045-RF, transcript variant F (Mhcl), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_141240.1 |
CG14656-RA (CG14656), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_169701.2 |
CG31045-RB, transcript variant B (Mhcl), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_170650.3 |
CG31045-RC, transcript variant C (Mhcl), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_169700.2 |
CG31045-RA, transcript variant A (Mhcl), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_169703.1 |
CG31045-RD, transcript variant D (Mhcl), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_001043250.1 |
CG31045-RG, transcript variant G (Mhcl), mRNA |
| 0 |
0 |
1 |
18 |
49 |
NM_139356.1 |
CG3524-RA (v(2)k05816), mRNA |
| 0 |
0 |
1 |
6 |
7 |
NM_132956.1 |
CG9086-RA (CG9086), mRNA |
| 0 |
0 |
1 |
6 |
4 |
NM_166444.1 |
CG9485-RB, transcript variant B (CG9485), mRNA |
| 0 |
0 |
1 |
6 |
4 |
NM_166443.1 |
CG9485-RA, transcript variant A (CG9485), mRNA |
| 0 |
0 |
1 |
6 |
4 |
NM_137733.2 |
CG9485-RC, transcript variant C (CG9485), mRNA |
| 0 |
0 |
1 |
5 |
4 |
NM_078711.2 |
CG1424-RA (mst), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_176195.1 |
CG33017-RB (CG33017), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_130497.2 |
CG13363-RA (Suv4-20), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_135513.3 |
CG5722-RA (NPC1), mRNA |
| 0 |
0 |
1 |
3 |
6 |
NM_079645.3 |
CG9734-RB, transcript variant B (glob1), mRNA |
| 0 |
0 |
1 |
3 |
6 |
NM_169680.1 |
CG9734-RD, transcript variant D (glob1), mRNA |
| 0 |
0 |
1 |
3 |
6 |
NM_169679.1 |
CG9734-RC, transcript variant C (glob1), mRNA |
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