Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
discarded
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
8652R-1 |
Symbol |
Ugt37c1 |
Full Name |
UDP-glycosyltransferase 37c1 |
CG No |
CG8652 |
Old CG No |
CG8652 |
Synonyms |
EG:EG0003.4, AC 004641A, LD15335, DmeUgt37c1, CG8652, Ugt37c1 |
Accession No (Link to NCBI) |
NM_080268.1 |
Inserted Chr. |
ll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
Map Viewer |
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Reference
[Please submit your publication]
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Umetsu D, Dunst S, Dahmann C. An RNA interference screen for genes required to shape the anteroposterior compartment boundary in Drosophila identifies the Eph receptor. PLoS One (2014) 9(12) e114340
[
PubMed ID = 25473846
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgACACCAGGCAATGCCTCAAAT |
Primer Seq. 3' |
aatctagaggtaccAGCCGGGTTAGGAAAACTAAG |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 ACACCAGGCA ATGCCTCAAA TATTTTCTAC AAGGACTGGC TGCCCCAAGA TGATATCCTG
0061 GCACATCCGA ATACCAAACT CTTTGTCACA CATGCCGGCA AGGGCAGCAT CACCGAATCC
0121 CAGTATCATG GTGTCCCAAT GGTGGCACTG CCCATTTTCG GTGACCATCC ATTGAATGCG
0181 GCTCTAATGG TAAACTTCGG GATATGGCGT TTCACTTGAT TTGCAGACCA TCACCGAAGA
0241 TACTTTCCGC GAGGCCATCA ACGAAGTCCT GGAAAATGAC AAGTACACTC AAGCGGTTCG
0301 CAAATTCTCC NCCCTTTACA GGGATCGACC TTTAACTCCC AGGCAATCTG TTCTTTTCTG
0361 GGTGGATTAC GTTCTGAGGC ATCATGGTGC TCCCAATTTG CAGAGTCCAN CGGTGCACAT
0421 GGGATTTGTT GAGCTACACA ACTTGGATAT CTACGCCTTG GTGCTTGCGA TCCTGATATT
0481 CTTAGTTTTC CTAACCCGGC T |
in silico PCR Fragment |
0001 ACACCAGGCA ATGCCTCAAA TATTTTCTAC AAGGACTGGC TGCCCCAAGA TGATATCCTG
0061 GCACATCCGA ATACCAAACT CTTTGTCACA CATGCCGGCA AGGGCAGCAT CACCGAATCC
0121 CAGTATCATG GTGTCCCAAT GGTGGCACTG CCCATTTTCG GTGACCATCC ATTGAATGCG
0181 GCTCTAATGG TAAA-TTCGG GATATGGCGT TTCACTTGAT TTGCAGACCA TCACCGAAGA
0241 TACTTTCCGC GAGGCCATCA ACGAAGTCCT GGAAAATGAC AAGTACACTC AAGCGGTTCG
0301 CAAATTCTCC GCCCTTTACA GGGATCGACC TTTAACTCCC AGGCAATCTG TTCTTTTCTG
0361 GGTGGATTAC GTTCTGAGGC ATCATGGTGC TCCCAATTTG CAGAGTCCAG CGGTGCACAT
0421 GGGATTTGTT GAGCTACACA ACTTGGATAT CTACGCCTTG GTGCTTGCGA TCCTGATATT
0481 CTTAGTTTTC CTAACCCGGC T |
Assemble Data |
8652R-1.IR_full 1 ACACCAGGCAATGCCTCAAATATTTTCTACAAGGACTGGCTGCCCCAAGATGATATCCTG 60
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8652R-1.in silico 1 ACACCAGGCAATGCCTCAAATATTTTCTACAAGGACTGGCTGCCCCAAGATGATATCCTG 60
8652R-1.IR_full 61 GCACATCCGAATACCAAACTCTTTGTCACACATGCCGGCAAGGGCAGCATCACCGAATCC 120
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8652R-1.in silico 61 GCACATCCGAATACCAAACTCTTTGTCACACATGCCGGCAAGGGCAGCATCACCGAATCC 120
8652R-1.IR_full 121 CAGTATCATGGTGTCCCAATGGTGGCACTGCCCATTTTCGGTGACCATCCATTGAATGCG 180
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8652R-1.in silico 121 CAGTATCATGGTGTCCCAATGGTGGCACTGCCCATTTTCGGTGACCATCCATTGAATGCG 180
8652R-1.IR_full 181 GCTCTAATGGTAAACTTCGGGATATGGCGTTTCACTTGATTTGCAGACCATCACCGAAGA 240
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8652R-1.in silico 181 GCTCTAATGGTAAA-TTCGGGATATGGCGTTTCACTTGATTTGCAGACCATCACCGAAGA 240
8652R-1.IR_full 241 TACTTTCCGCGAGGCCATCAACGAAGTCCTGGAAAATGACAAGTACACTCAAGCGGTTCG 300
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8652R-1.in silico 241 TACTTTCCGCGAGGCCATCAACGAAGTCCTGGAAAATGACAAGTACACTCAAGCGGTTCG 300
8652R-1.IR_full 301 CAAATTCTCCNCCCTTTACAGGGATCGACCTTTAACTCCCAGGCAATCTGTTCTTTTCTG 360
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8652R-1.in silico 301 CAAATTCTCCGCCCTTTACAGGGATCGACCTTTAACTCCCAGGCAATCTGTTCTTTTCTG 360
8652R-1.IR_full 361 GGTGGATTACGTTCTGAGGCATCATGGTGCTCCCAATTTGCAGAGTCCANCGGTGCACAT 420
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8652R-1.in silico 361 GGTGGATTACGTTCTGAGGCATCATGGTGCTCCCAATTTGCAGAGTCCAGCGGTGCACAT 420
8652R-1.IR_full 421 GGGATTTGTTGAGCTACACAACTTGGATATCTACGCCTTGGTGCTTGCGATCCTGATATT 480
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8652R-1.in silico 421 GGGATTTGTTGAGCTACACAACTTGGATATCTACGCCTTGGTGCTTGCGATCCTGATATT 480
8652R-1.IR_full 481 CTTAGTTTTCCTAACCCGGCT 501
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8652R-1.in silico 481 CTTAGTTTTCCTAACCCGGCT 501
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
0 |
NM_080268.1 |
CG8652-RA (Ugt37c1), mRNA |
0.62 |
3 |
24 |
35 |
33 |
NM_144372.1 |
CG13270-RA (Ugt36Ba), mRNA |
0 |
0 |
6 |
25 |
26 |
NM_144371.1 |
CG13271-RA (Ugt36Bb), mRNA |
0 |
0 |
1 |
7 |
8 |
NM_140844.1 |
CG14085-RA, transcript variant A (CG14085), mRNA |
0 |
0 |
1 |
7 |
8 |
NM_176350.1 |
CG14085-RB, transcript variant B (CG14085), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_136926.1 |
CG13155-RA (CG13155), mRNA |
0 |
0 |
0 |
17 |
23 |
NM_165193.1 |
CG17932-RB, transcript variant B (Ugt36Bc), mRNA |
0 |
0 |
0 |
17 |
23 |
NM_144370.2 |
CG17932-RA, transcript variant A (Ugt36Bc), mRNA |
0 |
0 |
0 |
7 |
19 |
NM_080269.2 |
CG9481-RA (Ugt37b1), mRNA |
0 |
0 |
0 |
6 |
5 |
NM_057262.2 |
CG1828-RA, transcript variant A (dre4), mRNA |
0 |
0 |
0 |
6 |
5 |
NM_167922.1 |
CG1828-RB, transcript variant B (dre4), mRNA |
0 |
0 |
0 |
5 |
8 |
NM_137585.2 |
CG11007-RA (CG11007), mRNA |
0 |
0 |
0 |
4 |
6 |
NM_136961.1 |
CG8778-RA (CG8778), mRNA |
0 |
0 |
0 |
4 |
5 |
NM_167095.1 |
CG32743-RA (Smg1), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_135525.1 |
CG5604-RA (CG5604), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_079395.2 |
CG9695-RA (Dab), mRNA |
0 |
0 |
0 |
3 |
9 |
NM_078883.1 |
CG11012-RA (Ugt37a1), mRNA |
0 |
0 |
0 |
3 |
7 |
NM_001031952.1 |
CG11714-RA, transcript variant A (CG11714), mRNA |
0 |
0 |
0 |
3 |
7 |
NM_001031953.1 |
CG6128-RA, transcript variant A (CG6128), mRNA |
0 |
0 |
0 |
3 |
6 |
NM_140945.1 |
CG6480-RA (CG6480), mRNA |
0 |
0 |
0 |
3 |
6 |
NM_142340.2 |
CG5148-RA (CG5148), mRNA |
0 |
0 |
0 |
3 |
6 |
NM_135207.2 |
CG11319-RA (CG11319), mRNA |
0 |
0 |
0 |
3 |
6 |
NM_135853.2 |
CG18095-RA (CG18095), mRNA |
0 |
0 |
0 |
3 |
5 |
NM_137589.2 |
CG16716-RB, transcript variant B (CG16716), mRNA |
0 |
0 |
0 |
3 |
5 |
NM_166371.1 |
CG16716-RA, transcript variant A (CG16716), mRNA |
0 |
0 |
0 |
3 |
5 |
NM_136517.2 |
CG8707-RA (CG8707), mRNA |
0 |
0 |
0 |
3 |
4 |
NM_142930.2 |
CG10198-RA (Nup98), mRNA |
0 |
0 |
0 |
3 |
4 |
NM_206570.1 |
CG10772-RF, transcript variant F (Fur1), mRNA |
0 |
0 |
0 |
3 |
4 |
NM_168227.2 |
CG7462-RB, transcript variant B (Ank2), mRNA |
0 |
0 |
0 |
3 |
4 |
NM_139891.3 |
CG7462-RC, transcript variant C (Ank2), mRNA |
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Wing Disc |
GFP
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Puc
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Caspase
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DAPI
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Merge
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Figure
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JNK signal
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Caspase-3 signal
N |
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++ |
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DB |
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+ |
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DC |
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+ |
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DM |
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+ |
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VM |
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VB |
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