Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
discarded
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
8534R-1 |
Symbol |
CG8534 |
Full Name |
CG8534 |
CG No |
CG8534 |
Old CG No |
CG8534 |
Synonyms |
CG8534 |
Accession No (Link to NCBI) |
NM_141698.1 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
Map Viewer |
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Reference
[Please submit your publication]
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Ohhara Y, Hoshino G, Imahori K, Matsuyuki T, Yamakawa-Kobayashi K. The Nutrient-Responsive Molecular Chaperone Hsp90 Supports Growth and Development in Drosophila. Front Physiol (2021) 12 690564
[
PubMed ID = 34239451
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCATCGGAAGTCCATGGCCATC |
Primer Seq. 3' |
aatctagaggtaccTGCTGACGGAGGACAGGTAGT |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 CATCGGAAGT CCATGGCCAT CGCTGACCAT CGTTTCGCTC TATCTGCTGT TTGTCTTGAA
0061 GTTAGGCAGG AAGTTCATGG AGAACAGAAA GCCCTACGAT CTCCGCAGAG TCATCAGGGC
0121 ATACAACATT ATGCAGATTG TCTACAACGG CGTTATTCTG ATAGCGGGTC TTCACTTTTT
0181 GTTCGTCCTG AAGGCCTACG ACCTGCGATG CATCACCAAA CTGCCGCTGG ATCACGAGCT
0241 GAAGAGCCGA GAAAGATGGT TGACCTACTC GTACTTCTTC AACAAGTTCA TGGATCTGCT
0301 GGAGACTGTG TTCTTTGTGC TGCGCAAGAA GGATCGCCAG ATATCCTTCC TGCACGTCTT
0361 CCACCACCTG GTGATGTCCT TTGGCGGATA CCTGCACATT ACCTTCAACG GCTATGGAGG
0421 CACTCTGTTC CCATTATGCC TGCTCAATGT GGCGGTCCAT GTGATCATGT ACGCCTACTA
0481 CTACCTGTCC TCCGTCAGCA |
in silico PCR Fragment |
0001 CATCGGAAGT CCATGGCCAT CGCTGACCAT CGTTTCGCTC TATCTGCTGT TTGTCTTGAA
0061 GTTAGGCAGG AAGTTCATGG AGAACAGAAA GCCCTACGAT CTCCGCAGAG TCATCAGGGC
0121 ATACAACATT ATGCAGATTG TCTACAACGG CGTTATTCTG ATAGCGGGTC TTCACTTTTT
0181 GTTCGTCCTG AAGGCCTACG ACCTGCGATG CATCACCAAA CTGCCGCTGG ATCACGAGCT
0241 GAAGAGCCGA GAAAGATGGT TGACCTACTC GTACTTCTTC AACAAGTTCA TGGATCTGCT
0301 GGAGACTGTG TTCTTTGTGC TGCGCAAGAA GGATCGCCAG ATATCCTTCC TGCACGTCTT
0361 CCACCACCTG GTGATGTCCT TTGGCGGATA CCTGCACATT ACCTTCAACG GCTATGGAGG
0421 CACTCTGTTC CCATTATGCC TGCTCAATGT GGCGGTCCAT GTGATCATGT ACGCCTACTA
0481 CTACCTGTCC TCCGTCAGCA |
Assemble Data |
8534R-1.IR_full 1 CATCGGAAGTCCATGGCCATCGCTGACCATCGTTTCGCTCTATCTGCTGTTTGTCTTGAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8534R-1.in silico 1 CATCGGAAGTCCATGGCCATCGCTGACCATCGTTTCGCTCTATCTGCTGTTTGTCTTGAA 60
8534R-1.IR_full 61 GTTAGGCAGGAAGTTCATGGAGAACAGAAAGCCCTACGATCTCCGCAGAGTCATCAGGGC 120
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8534R-1.in silico 61 GTTAGGCAGGAAGTTCATGGAGAACAGAAAGCCCTACGATCTCCGCAGAGTCATCAGGGC 120
8534R-1.IR_full 121 ATACAACATTATGCAGATTGTCTACAACGGCGTTATTCTGATAGCGGGTCTTCACTTTTT 180
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8534R-1.in silico 121 ATACAACATTATGCAGATTGTCTACAACGGCGTTATTCTGATAGCGGGTCTTCACTTTTT 180
8534R-1.IR_full 181 GTTCGTCCTGAAGGCCTACGACCTGCGATGCATCACCAAACTGCCGCTGGATCACGAGCT 240
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8534R-1.in silico 181 GTTCGTCCTGAAGGCCTACGACCTGCGATGCATCACCAAACTGCCGCTGGATCACGAGCT 240
8534R-1.IR_full 241 GAAGAGCCGAGAAAGATGGTTGACCTACTCGTACTTCTTCAACAAGTTCATGGATCTGCT 300
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8534R-1.in silico 241 GAAGAGCCGAGAAAGATGGTTGACCTACTCGTACTTCTTCAACAAGTTCATGGATCTGCT 300
8534R-1.IR_full 301 GGAGACTGTGTTCTTTGTGCTGCGCAAGAAGGATCGCCAGATATCCTTCCTGCACGTCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8534R-1.in silico 301 GGAGACTGTGTTCTTTGTGCTGCGCAAGAAGGATCGCCAGATATCCTTCCTGCACGTCTT 360
8534R-1.IR_full 361 CCACCACCTGGTGATGTCCTTTGGCGGATACCTGCACATTACCTTCAACGGCTATGGAGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8534R-1.in silico 361 CCACCACCTGGTGATGTCCTTTGGCGGATACCTGCACATTACCTTCAACGGCTATGGAGG 420
8534R-1.IR_full 421 CACTCTGTTCCCATTATGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8534R-1.in silico 421 CACTCTGTTCCCATTATGCCTGCTCAATGTGGCGGTCCATGTGATCATGTACGCCTACTA 480
8534R-1.IR_full 481 CTACCTGTCCTCCGTCAGCA 500
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8534R-1.in silico 481 CTACCTGTCCTCCGTCAGCA 500
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
0 |
NM_141698.1 |
CG8534-RA (CG8534), mRNA |
2.28 |
11 |
34 |
31 |
19 |
NM_141701.2 |
CG9459-RA (CG9459), mRNA |
1.65 |
8 |
12 |
26 |
32 |
NM_141699.1 |
CG16905-RA (CG16905), mRNA |
1.24 |
6 |
2 |
5 |
23 |
NM_170023.1 |
CG6921-RC, transcript variant C (CG6921), mRNA |
1.24 |
6 |
2 |
5 |
23 |
NM_170022.1 |
CG6921-RA, transcript variant A (CG6921), mRNA |
1.24 |
6 |
2 |
5 |
23 |
NM_142805.3 |
CG6921-RB, transcript variant B (CG6921), mRNA |
1.03 |
5 |
35 |
35 |
28 |
NM_169312.1 |
CG9458-RA (CG9458), mRNA |
1.03 |
5 |
4 |
14 |
22 |
NM_142803.1 |
CG5326-RA, transcript variant A (CG5326), mRNA |
0.82 |
4 |
2 |
4 |
7 |
NM_176539.1 |
CG33110-RA (CG33110), mRNA |
0.62 |
3 |
6 |
14 |
15 |
NM_141700.1 |
CG16904-RA (CG16904), mRNA |
0.41 |
2 |
6 |
11 |
20 |
NM_142806.1 |
CG5278-RA (CG5278), mRNA |
0 |
0 |
6 |
7 |
12 |
NM_137521.1 |
CG18609-RA (CG18609), mRNA |
0 |
0 |
3 |
7 |
9 |
NM_132075.3 |
CG3781-RA (CG3781), mRNA |
0 |
0 |
3 |
3 |
5 |
NM_142389.2 |
CG7655-RA (CG7655), mRNA |
0 |
0 |
3 |
2 |
2 |
NM_139990.2 |
CG5971-RA (CG5971), mRNA |
0 |
0 |
1 |
10 |
20 |
NM_141497.1 |
CG2781-RA (CG2781), mRNA |
0 |
0 |
1 |
6 |
11 |
NM_165718.1 |
CG30008-RA (CG30008), mRNA |
0 |
0 |
1 |
5 |
4 |
NM_134500.2 |
CG14224-RA (CG14224), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_139801.2 |
CG10103-RA (CG10103), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_166498.1 |
CG13499-RC, transcript variant C (CG13499), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_137784.1 |
CG13499-RB, transcript variant B (CG13499), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_166499.1 |
CG13499-RD, transcript variant D (CG13499), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_166497.1 |
CG13499-RA, transcript variant A (CG13499), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_139441.2 |
CG8960-RA, transcript variant A (CG8960), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_001032029.1 |
CG33934-RA, transcript variant A (CG33934), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_001032028.1 |
CG33934-RB, transcript variant B (CG33934), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_001032031.1 |
CG33933-RA, transcript variant A (Indy-2), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_143616.3 |
CG1635-RA (CG1635), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_142367.1 |
CG5866-RA (CG5866), mRNA |
0 |
0 |
0 |
8 |
16 |
NM_170095.1 |
CG31141-RA (CG31141), mRNA |
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Wing Disc |
GFP
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Puc
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Caspase
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DAPI
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Merge
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Figure
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JNK signal
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Caspase-3 signal
N |
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+ |
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DB |
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+ |
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DC |
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++ |
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DM |
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+ |
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VM |
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VB |
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Dcompartment |
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Penetrance |
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- |
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