Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
18495R-3 |
Symbol |
Prosalpha6 |
Full Name |
Proteasome alpha6 subunit |
CG No |
CG18495 |
Old CG No |
CG18495 |
Synonyms |
CG18495, Prosalpha1, Prosalpha6 |
Accession No (Link to NCBI) |
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Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Ohhara Y, Nakamura A, Kato Y, Yamakawa-Kobayashi K. Chaperonin TRiC/CCT supports mitotic exit and entry into endocycle in Drosophila. PLoS Genet (2019) 15(4) e1008121
[
PubMed ID = 31034473
]
[
RRC reference
]
Yano H, Yamamoto-Hino M, Awano W, Aoki-Kinoshita KF, Tsuda-Sakurai K, Okano H, Goto S. Identification of proteasome components required for apical localization of Chaoptin using functional genomics. J Neurogenet (2012) 26(1) 53-63
[
PubMed ID = 22417167
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgATGTCTCGCGGAAGTTCAGCC |
Primer Seq. 3' |
aatctagaggtaccTGCAGGCCTTGAACCCGCTGA |
Predicted Fragment Size |
499 |
IR fragment full Seq |
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in silico PCR Fragment |
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Assemble Data |
18495R-3.IR full 1 ATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGACACATCACGATCTTCTCTCCGGAGGGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18495R-3.in silico 1 ATGTCTCGCGGAAGTTCAGCCGGCTTTGACAGACACATCACGATCTTCTCTCCGGAGGGA 60
18495R-3.IR full 61 CGCCTCTACCAAGTGGAGTACGCCTTCAAGGCTATTGCCCAGGAGAACATCACCACGGTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18495R-3.in silico 61 CGCCTCTACCAAGTGGAGTACGCCTTCAAGGCTATTGCCCAGGAGAACATCACCACGGTG 120
18495R-3.IR full 121 GCGCTGAAGAGTGGCGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAAC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18495R-3.in silico 121 GCGCTGAAGAGTGGCGACTGTGCCGTGGTGGCCACCCAAAAAAAAGTGACCGAGAAGAAC 180
18495R-3.IR full 181 ATCGTGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGCGCAATG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18495R-3.in silico 181 ATCGTGCCTGAAACGGTGACCCACCTGTTCCGCATCACCAAGGACATTGGATGCGCAATG 240
18495R-3.IR full 241 ACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAGATACGAGGCCGCCAAC 300
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18495R-3.in silico 241 ACCGGACGCATAGCTGATTCCCGCTCACAGGTGCAGAAGGCCAGATACGAGGCCGCCAAC 300
18495R-3.IR full 301 TTCCGCTACAAGTACGGCTACGAAATGCCCGTGGATGTGCTGTGTCGTCGAATTGCGGAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18495R-3.in silico 301 TTCCGCTACAAGTACGGCTACGAAATGCCCGTGGATGTGCTGTGTCGTCGAATTGCGGAT 360
18495R-3.IR full 361 ATCAACCAGGTGTACACGCAGAATGCCGAGATNCGTCCGCTCGGCTGCANCATGGTGCTG 420
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
18495R-3.in silico 361 ATCAACCAGGTGTACACGCAGAATGCCGAGATGCGTCCGCTCGGCTGCAGCATGGTGCTG 420
18495R-3.IR full 421 ATCGCTTACGACAATGAAATCGGACCCAGCGTTTACAAGACGGACCCAGCTGGCTACTTC 480
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
18495R-3.in silico 421 ATCGCTTACGACAATGAAATCGGCCCCAGCGTTTACAAGACGGACCCGGCTGGCTACTTC 480
18495R-3.IR full 481 AGCGGGTTCAAGGCCTGCA 499
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18495R-3.in silico 481 AGCGGGTTCAAGGCCTGCA 499
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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Wing Disc |
GFP
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Puc
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Caspase
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DAPI
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Merge
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Figure
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JNK signal
N |
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++ |
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DB |
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++ |
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DC |
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++ |
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DM |
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++ |
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VM |
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+ |
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VB |
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Caspase-3 signal
N |
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+ |
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DB |
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+ |
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DC |
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+ |
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DM |
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++ |
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VM |
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++ |
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VB |
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++ |
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Dcompartment |
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Penetrance |
++ |
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