Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
17760R-5 |
Symbol |
CG17760 |
Full Name |
CG17760 |
CG No |
CG17760 |
Old CG No |
CG17760 |
Synonyms |
BcDNA:SD21019, CG17760 |
Accession No (Link to NCBI) |
NM_001043074.1 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Rauskolb C, Pan G, Reddy BV, Oh H, Irvine KD. Zyxin links fat signaling to the hippo pathway. PLoS Biol (2011) 9(6) e1000624
[
PubMed ID = 21666802
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgTTTGGACAAGGAGAGGAAGCA |
Primer Seq. 3' |
aatctagaggtaccCGGACATGGCAACCAAAAACA |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 TTTGGACAAG GAGAGGAAGC AGTTCACCAA AAATGTTTTC CAAAACATAT TCATGGCCAT
0061 GCAGTCGATG ATCAGTGCAA TGGATACTCT GCGAATTCCC TACGGTCAGC AGGAGCATAG
0121 TAAACTTGCC GATCTGGTGA AGAGCATCGA TTACAAGACA GTTACCAGAC TGGAGGCGCC
0181 CTACTTGAAT GCCATCAAAA CGCTTTGGAA AGATGCTGGC ATCAAGGAGT GCTACAATCG
0241 TCGTAGGGAA TATCAGCTGA CTGATTCAAC TGAATACTTT TTGAATGACA TAGCGCGAAT
0301 TGAACGGAGT GATTACCAGG CCACTGATCA GGACATTCTT CATGTTCGAG CGCCAACAAC
0361 CAATATTGTT GAGTATCCCT TCAATTTGGA CGGTTTTCTG ATAAGATTGG TGGACGTCGC
0421 TGGTCAGCGA ACGGAGAGAA GAAAGTGGAT TCATTGTTTT TCCAATGTGA CATCAATTAT
0481 GTTTTTGGTT GCCATGTCCG |
in silico PCR Fragment |
0001 TTTGGACAAG GAGAGGAAGC AGTTCACCAA AAATGTTTTC CAAAACATAT TCATGGCCAT
0061 ACAGTCGATG ATCAGTGCAA TGGATACTCT GCGAATTCCC TACGGTCAGC AGGAGCATAG
0121 TAAACTTGCC GATCTGGTGA AGAGCATCGA TTACAAGACA GTTACCAGAC TGGAGGCGCC
0181 CTACTTGAAT GCCATCAAAA CTCTTTGGAA AGATGCTGGC ATCAAGGAGT GCTACAATCG
0241 TCGTAGGGAA TATCAGCTGA CTGATTCAAC TGAATACTTT TTGAATGACA TAGCGCGAAT
0301 TGAACGGAGT GATTACCAGG CCACTGATCA GGACATTCTT CATGTTCGAG CGCCAACAAC
0361 CAATATTGTT GAGTATCCCT TCAATTTGGA CGGTTTTCTG ATAAGATTGG TGGACGTCGC
0421 TGGTCAGCGA ACGGAGAGAA GAAAGTGGAT TCATTGTTTT TCCAATGTGA CATCAATTAT
0481 GTTTTTGGTT GCCATGTCCG |
Assemble Data |
17760R-5.IR_full 1 TTTGGACAAGGAGAGGAAGCAGTTCACCAAAAATGTTTTCCAAAACATATTCATGGCCAT 60
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17760R-5.in silico 1 TTTGGACAAGGAGAGGAAGCAGTTCACCAAAAATGTTTTCCAAAACATATTCATGGCCAT 60
17760R-5.IR_full 61 GCAGTCGATGATCAGTGCAATGGATACTCTGCGAATTCCCTACGGTCAGCAGGAGCATAG 120
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17760R-5.in silico 61 ACAGTCGATGATCAGTGCAATGGATACTCTGCGAATTCCCTACGGTCAGCAGGAGCATAG 120
17760R-5.IR_full 121 TAAACTTGCCGATCTGGTGAAGAGCATCGATTACAAGACAGTTACCAGACTGGAGGCGCC 180
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17760R-5.in silico 121 TAAACTTGCCGATCTGGTGAAGAGCATCGATTACAAGACAGTTACCAGACTGGAGGCGCC 180
17760R-5.IR_full 181 CTACTTGAATGCCATCAAAACGCTTTGGAAAGATGCTGGCATCAAGGAGTGCTACAATCG 240
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17760R-5.in silico 181 CTACTTGAATGCCATCAAAACTCTTTGGAAAGATGCTGGCATCAAGGAGTGCTACAATCG 240
17760R-5.IR_full 241 TCGTAGGGAATATCAGCTGACTGATTCAACTGAATACTTTTTGAATGACATAGCGCGAAT 300
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17760R-5.in silico 241 TCGTAGGGAATATCAGCTGACTGATTCAACTGAATACTTTTTGAATGACATAGCGCGAAT 300
17760R-5.IR_full 301 TGAACGGAGTGATTACCAGGCCACTGATCAGGACATTCTTCATGTTCGAGCGCCAACAAC 360
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17760R-5.in silico 301 TGAACGGAGTGATTACCAGGCCACTGATCAGGACATTCTTCATGTTCGAGCGCCAACAAC 360
17760R-5.IR_full 361 CAATATTGTTGAGTATCCCTTCAATTTGGACGGTTTTCTGATAAGATTGGTGGACGTCGC 420
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17760R-5.in silico 361 CAATATTGTTGAGTATCCCTTCAATTTGGACGGTTTTCTGATAAGATTGGTGGACGTCGC 420
17760R-5.IR_full 421 TGGTCAGCGAACGGAGAGAAGAAAGTGGATTCATTGTTTTTCCAATGTGACATCAATTAT 480
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17760R-5.in silico 421 TGGTCAGCGAACGGAGAGAAGAAAGTGGATTCATTGTTTTTCCAATGTGACATCAATTAT 480
17760R-5.IR_full 481 GTTTTTGGTTGCCATGTCCG 500
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17760R-5.in silico 481 GTTTTTGGTTGCCATGTCCG 500
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
2 |
NM_001043074.1 |
CG17760-RB (CG17760), mRNA |
4.35 |
21 |
47 |
80 |
78 |
NM_165925.1 |
CG17759-RF, transcript variant F (Galpha49B), mRNA |
4.35 |
21 |
47 |
80 |
78 |
NM_165924.1 |
CG17759-RD, transcript variant D (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
78 |
NM_165919.1 |
CG17759-RA, transcript variant A (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
78 |
NM_165923.1 |
CG17759-RG, transcript variant G (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
69 |
NM_165921.1 |
CG17759-RC, transcript variant C (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
69 |
NM_165922.1 |
CG17759-RE, transcript variant E (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
69 |
NM_078994.2 |
CG17759-RH, transcript variant H (Galpha49B), mRNA |
4.35 |
21 |
47 |
77 |
69 |
NM_165920.1 |
CG17759-RB, transcript variant B (Galpha49B), mRNA |
3.11 |
15 |
45 |
87 |
92 |
NM_001043073.1 |
CG30054-RC (CG30054), mRNA |
0 |
0 |
4 |
3 |
3 |
NM_135265.1 |
CG4971-RA (Wnt10), mRNA |
0 |
0 |
2 |
16 |
16 |
NM_165363.1 |
CG31626-RB, transcript variant B (CG31626), mRNA |
0 |
0 |
2 |
16 |
16 |
NM_165362.1 |
CG31626-RA, transcript variant A (CG31626), mRNA |
0 |
0 |
2 |
16 |
16 |
NM_136257.2 |
CG8677-RA (CG8677), mRNA |
0 |
0 |
2 |
3 |
3 |
NM_166260.1 |
CG30110-RA (CG30110), mRNA |
0 |
0 |
2 |
3 |
2 |
NM_139920.1 |
CG7504-RA (CG7504), mRNA |
0 |
0 |
2 |
2 |
3 |
NM_057576.3 |
CG6407-RA (Wnt5), mRNA |
0 |
0 |
2 |
2 |
2 |
NM_136745.3 |
CG12892-RA (Caf1-105), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_137456.2 |
CG5733-RA (CG5733), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205982.1 |
CG6214-RM, transcript variant M (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205980.1 |
CG6214-RO, transcript variant O (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205976.1 |
CG6214-RD, transcript variant D (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205975.1 |
CG6214-RE, transcript variant E (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205974.1 |
CG6214-RF, transcript variant F (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205977.1 |
CG6214-RC, transcript variant C (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_165020.2 |
CG6214-RA, transcript variant A (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205973.1 |
CG6214-RG, transcript variant G (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205979.1 |
CG6214-RP, transcript variant P (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205972.1 |
CG6214-RH, transcript variant H (MRP), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_205970.1 |
CG6214-RJ, transcript variant J (MRP), mRNA |
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Wing Disc |
GFP
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Puc
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Caspase
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DAPI
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Merge
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Figure
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JNK signal
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Caspase-3 signal
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