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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 12112R-2 
 Symbol CG12112  Full Name CG12112 
 CG No CG12112  Old CG No CG12112 
 Synonyms CG12112 
 Accession No (Link to NCBI) NM_132261.2 
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees semi-lethal 
 Map Viewer
 Reference
[Please submit your publication]
Molnar C, Casado M, López-Varea A, Cruz C, de Celis JF.
Genetic annotation of gain-of-function screens using RNA interference and in situ hybridization of candidate genes in the Drosophila wing.
Genetics (2012) 192(2) 741-52 [ PubMed ID = 22798488 ] [ RRC reference ]

Rauskolb C, Pan G, Reddy BV, Oh H, Irvine KD.
Zyxin links fat signaling to the hippo pathway.
PLoS Biol (2011) 9(6) e1000624 [ PubMed ID = 21666802 ] [ RRC reference ]

Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T.
RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc.
Gene Regul Syst Bio (2009) 3 11-20 [ PubMed ID = 19838331 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgTCAAGAGACTTTGCCTCGCCA 
 Primer Seq. 3'
aatctagaggtaccTTCCGAGGGTAGCGTCGGTTC 
 Predicted Fragment Size
470 
 IR fragment full Seq
0001 TCAAGAGACt TTGCCTCGCC ACCGAGAATA GTCATATCGC AGCCAATGCC ATGCTGCTAA 
0061 CAAAGATAGA TGAACTCAAT TCCCAAGTNC CTGTCGCAGC GCGCAGNAAA TCGAAAACTT 
0121 GACGAGGGCG GTTAAGACAC TTNCGGAATT CGTTAAGCAG TCGATGAAAA CGACCAAGCC 
0181 GAAGGCGAAG GGAAATCCGG ACGATGATTT TCCAATTATG TATGAGGAGG ATCTGGTCGA 
0241 AGTGAATCAC AAGATAAGCC AGGACTCCAG GGGGATCTAT ACGAATTNCA TGCGGAAATT 
0301 CCTGCGCCAG GGAAGATTAA GCCGCACCAT AAGACTCATT TTCTCCGAGG ACATCCTTCT 
0361 GAACTACAAT ATTGATGGGA ATCAGAAAAA GAAAAGACTA AAAGATCACG AACATCTGTT 
0421 TCGTTCGCTT ATGAACGCCA TCGGTCAGGT GGAACCGACG CTACCCTCGG AA 
 in silico PCR Fragment
0001 TCAAGAGACT TTGCCTCGCC ACCGAGAATA GTCATATCGC AGCCAATGCC ATGCTGCTAA 
0061 CAAAGATAGA TGAACTCAAT TCCCAAGT-C CTGTCGCAGC GCGCAG-AAA TCGAAAACTT 
0121 GACGAGGGCG GTTAAGACAC TTACGGAATT CGTTAAGCAG TCGATGAAAA CGACCAAGCC 
0181 GAAGGCGAAG GGAAATCCGG ACGATGATTT TCCAATTATG TATGAGGAGG ATCTGGTCGA 
0241 AGTGAATCAC AAGATAAGCC AGGACTCCAG GGGGATCTAT ACGAATTCCA TGCGGAAATT 
0301 CCTGCGCCAG GGAAGATTAA GCCGCACCAT AAGACTCATT TTCTCCGAGG ACATCCTTCT 
0361 GAACTACAAT ATTGATGGGA ATCAGAAAAA GAAAAGACTA AAAGATCACG AACATCTGTT 
0421 TCGTTCGCTT ATGAACGCCA TCGGTCAGGT GGAACCGACG CTACCCTCGG AA 
 Assemble Data

12112R-2.IR_full       1   TCAAGAGACTTTGCCTCGCCACCGAGAATAGTCATATCGCAGCCAATGCCATGCTGCTAA 60
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12112R-2.in silico     1   TCAAGAGACTTTGCCTCGCCACCGAGAATAGTCATATCGCAGCCAATGCCATGCTGCTAA 60


12112R-2.IR_full       61  CAAAGATAGATGAACTCAATTCCCAAGTNCCTGTCGCAGCGCGCAGNAAATCGAAAACTT 120
                           |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
12112R-2.in silico     61  CAAAGATAGATGAACTCAATTCCCAAGT-CCTGTCGCAGCGCGCAG-AAATCGAAAACTT 120


12112R-2.IR_full       121 GACGAGGGCGGTTAAGACACTTNCGGAATTCGTTAAGCAGTCGATGAAAACGACCAAGCC 180
                           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
12112R-2.in silico     121 GACGAGGGCGGTTAAGACACTTACGGAATTCGTTAAGCAGTCGATGAAAACGACCAAGCC 180


12112R-2.IR_full       181 GAAGGCGAAGGGAAATCCGGACGATGATTTTCCAATTATGTATGAGGAGGATCTGGTCGA 240
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12112R-2.in silico     181 GAAGGCGAAGGGAAATCCGGACGATGATTTTCCAATTATGTATGAGGAGGATCTGGTCGA 240


12112R-2.IR_full       241 AGTGAATCACAAGATAAGCCAGGACTCCAGGGGGATCTATACGAATTNCATGCGGAAATT 300
                           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
12112R-2.in silico     241 AGTGAATCACAAGATAAGCCAGGACTCCAGGGGGATCTATACGAATTCCATGCGGAAATT 300


12112R-2.IR_full       301 CCTGCGCCAGGGAAGATTAAGCCGCACCATAAGACTCATTTTCTCCGAGGACATCCTTCT 360
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12112R-2.in silico     301 CCTGCGCCAGGGAAGATTAAGCCGCACCATAAGACTCATTTTCTCCGAGGACATCCTTCT 360


12112R-2.IR_full       361 GAACTACAATATTGATGGGAATCAGAAAAAGAAAAGACTAAAAGATCACGAACATCTGTT 420
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12112R-2.in silico     361 GAACTACAATATTGATGGGAATCAGAAAAAGAAAAGACTAAAAGATCACGAACATCTGTT 420


12112R-2.IR_full       421 TCGTTCGCTTATGAACGCCATCGGTCAGGTGGAACCGACGCTACCCTCGGAA 472
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||
12112R-2.in silico     421 TCGTTCGCTTATGAACGCCATCGGTCAGGTGGAACCGACGCTACCCTCGGAA 472

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
cv 0mm 1mm 2mm 3mm target transcript off target name
100   452  NM_132261.2  CG12112-RA (CG12112), mRNA 
0   NM_137427.2  CG5036-RA (CG5036), mRNA 
0   10  NM_080762.2  CG15224-RB, transcript variant B (CkIIbeta), mRNA 
0   12  54  NM_141762.2  CG14692-RA (CG14692), mRNA 
0   NM_169782.1  CG31243-RA, transcript variant A (cpo), mRNA 
0   NM_080105.2  CG31243-RF, transcript variant F (cpo), mRNA 
0   NM_169781.1  CG31243-RE, transcript variant E (cpo), mRNA 
0   NM_078499.3  CG4690-RA (Tsp5D), mRNA 
0   NM_139369.1  CG7879-RA, transcript variant A (CG7879), mRNA 
0   NM_167896.1  CG7879-RB, transcript variant B (CG7879), mRNA 
0   NM_001014632.1  CG31243-RG, transcript variant G (cpo), mRNA 
0   NM_080313.2  CG9659-RC, transcript variant C (egh), mRNA 
0   NM_166946.1  CG9659-RB, transcript variant B (egh), mRNA 
0   NM_080132.2  CG11295-RA (l(2)dtl), mRNA 
0   NM_166841.1  CG3777-RC, transcript variant C (CG3777), mRNA 
0   NM_130483.2  CG3777-RB, transcript variant B (CG3777), mRNA 
0   NM_166840.1  CG3777-RA, transcript variant A (CG3777), mRNA 
0   NM_167646.1  CG32827-RA (CG32827), mRNA 
0   NM_079114.1  CG11290-RA (enok), mRNA 
0   NM_137173.2  CG11807-RA (CG11807), mRNA 
0   NM_080029.3  CG13761-RB (Bzd), mRNA 
0   NM_141402.1  CG15186-RA, transcript variant A (CG15186), mRNA 
0   NM_206436.1  CG15186-RC, transcript variant C (CG15186), mRNA 
0   NM_169145.1  CG15186-RB, transcript variant B (CG15186), mRNA 
0   NM_001038739.1  CG9900-RC, transcript variant C (mit(1)15), mRNA 
0   NM_080162.3  CG9900-RB, transcript variant B (mit(1)15), mRNA 
0   NM_134588.1  CG1503-RA (CG1503), mRNA 
0   NM_175981.2  CG33121-RA (CG33121), mRNA 
0   NM_057244.3  CG10501-RA, transcript variant A (amd), mRNA 
0   NM_170033.1  CG5248-RC, transcript variant C (loco), mRNA 
 Wing Disc
GFP
Puc
Caspase
DAPI
Merge
Figure
JNK signal
N
 
DB
 
DC
+- 
DM
+- 
VM
 
VB
 
Caspase-3 signal
N
DB
DC
DM
 
VM
 
VB
 
Dcompartment   Penetrance
     

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