|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR33-14
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
erpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
erpA
Search strains by all related name:
erpA b0156 ECK0155 JW0152 yadR
|
General information (Go to Linear View: )
|
|
Gene Name
|
erpA
|
|
Alternative name
|
b0156,ECK0155,JW0152,yadR
|
|
Location, Length
|
176,610 - 176,954
(
+
)
;
3.81
min
;
345
(bp) ,
114
(aa)
|
|
Product
|
iron-sulfur cluster insertion protein
|
|
Operon Name
|
erpA
|
|
Note
|
|
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Function
|
|
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Gene Ontology
|
GO:0005198
;
structural molecule activity ( erpA )
GO:0005506
;
iron ion binding ( erpA )
GO:0016226
;
iron-sulfur cluster assembly ( erpA )
GO:0046872
;
metal ion binding ( erpA )
GO:0051536
;
iron-sulfur cluster binding ( erpA )
|
|
PID
|
1786351
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YADR_ECOLI
(
P37026
)
|
|
- Protein name
|
Hypothetical protein yadR.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b0156, c0191, z0167, ECs0160, SF0148, S0151;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yadR
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Hi1723 Solution Structure
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yadR
|
|
PSI-BLAST
|
Protein HI1723
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yadR [Escherichia coli CFT073]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
HESB
|
| Sequences |
Amino acid
FASTA format
|
0001 MSDDVALPLE FTDAAANKVK SLIADEDNPN LKLRVYITGG GCSGFQYGFT FDDQVNEGDM TIEKQGVGLV
0071 VDPMSLQYLV GGSVDYTEGL EGSRFIVTNP NAKSTCGCGS SFSI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGCCAGCGAG AATACTTGAA CGAAATACCA
-070 GGGTATTAGA TAATGGCGAT TATTATTGGG TTAGAATTTG CCCAATTGCC GATGTCGTTT GGAGCAAAAT
0001 atgagtgatg acgtagcact gccgctggag tttaccgacg cagcagccaa caaagttaaa agcctgatcg
0071 ctgacgaaga taacccgaat ctgaaattac gcgtgtatat caccggtggc ggttgcagcg gcttccagta
0141 tggtttcacc tttgatgatc aggtgaacga aggcgatatg accatcgaaa aacagggcgt tggcctggtg
0211 gttgatccga tgagcctgca atatctggtc ggcggttccg ttgattatac cgaaggtctg gaaggttctc
0281 gtttcatcgt gaccaacccg aacgcgaaaa gcacctgcgg ttgcggttct tcctttagta tctaaTCTGT
0351 TGTTCATGTG CCGGATAAAC TATCCGGCAC ATCTTCTCTC TTCAACGCCC ATTCTCATCC AGCGCAAACG
0421 TCGGTAGCTT AAGATGCCAA CGAAT
|
