|
PEC Original Annotations
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|
Essentiality
|
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Class
|
non-essential
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|
References (PMID)
|
|
|
Deletion
|
OCR32
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yadN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yadN
Search strains by all related name:
yadN b0141 ECK0140 JW0137
|
General information (Go to Linear View: )
|
|
Gene Name
|
yadN
|
|
Alternative name
|
b0141,ECK0140,JW0137
|
|
Location, Length
|
156,299 - 156,883
(
-
)
;
3.37
min
;
585
(bp) ,
194
(aa)
|
|
Product
|
putative fimbrial-like adhesin protein
|
|
Operon Name
|
yadN
|
|
Note
|
putative fimbrial-like protein; GO_component: GO:0009289 - pilus
|
|
Function
|
putative structure; Not classified
|
|
Gene Ontology
|
GO:0007155
;
cell adhesion ( yadN )
GO:0009289
;
fimbrium ( yadN )
GO:0042995
;
cell projection ( yadN )
|
|
PID
|
1786334
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YADN_ECOLI
(
P37050
)
|
|
- Protein name
|
Hypothetical fimbrial-like protein yadN precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yadN; OrderedLocusNames=b0141;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yadN
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical fimbrial-like protein yadN precursor
|
|
PSI-BLAST
|
Fimbrin-like protein fimI precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted fimbrial-like adhesin protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MSKKLGFALS GLMLAMVAGT ASADMDGGQL NISGLVVDNT CETRVDGGNK DGLILLQTAT VGEIDAGVLN
0071 DTVGAKAKPF SITVDCSKAN PNPGSTAKMT FGSVFFGNSK GTLNNDMSIN NPSDGVNIAL HNIDGSTIKQ
0141 VQINNPGDVY TKALDATTKS AVYDFKASYV RAVADQTATA GYVKTNTAYT ITYQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttgctcatta atatctaaca tttgtttctc
-070 ctatttgtgt catgaatagt cattcttcaa acatgtagtc tgactaatgg aattttatta aaggattttt
0001 atgtctaaaa aattaggttt tgccctgtct ggtcttatgc tggcgatggt tgcaggtact gcttctgctg
0071 atatggacgg cggtcagtta aatatcagtg gtctggttgt tgataacacc tgtgaaaccc gcgttgacgg
0141 cggtaacaag gatggtctga tcctgctgca aaccgcaacc gttggtgaaa tcgatgctgg cgtactgaat
0211 gacaccgttg gcgctaaagc taaacctttc agcatcaccg ttgactgcag caaagcaaat ccgaatccag
0281 gtagcacggc taaaatgacc ttcggttctg ttttctttgg taacagcaaa gggactttga acaacgacat
0351 gtctattaac aacccatctg acggcgttaa tatcgctcta cacaatattg atggttccac tatcaaacag
0421 gttcaaatta acaaccctgg cgatgtgtat actaaagccc tggatgcaac gacaaaatct gctgtttatg
0491 attttaaagc gtcttacgtt cgtgccgtcg cagaccaaac agcaactgct ggttatgtaa aaactaacac
0561 tgcatacacc attacttatc agtaagtatt caccagttaa attgattgaa tgaatataca gggaataata
0631 atttctattt tatattattc cctgttttaa ttaactctat cagggatggt ttatg
|
