|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
ppdel-6
(LD)
,
OCR32
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yadM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yadM
Search strains by all related name:
yadM b0138 ECK0137 JW0134
|
General information (Go to Linear View: )
|
|
Gene Name
|
yadM
|
|
Alternative name
|
b0138,ECK0137,JW0134
|
|
Location, Length
|
152,243 - 152,812
(
-
)
;
3.28
min
;
570
(bp) ,
189
(aa)
|
|
Product
|
putative fimbrial-like adhesin protein
|
|
Operon Name
|
yadMLKC
|
|
Note
|
putative fimbrial-like protein; GO_component: GO:0009289 - pilus
|
|
Function
|
putative structure; Not classified
|
|
Gene Ontology
|
GO:0007155
;
cell adhesion ( yadM )
GO:0009289
;
fimbrium ( yadM )
|
|
PID
|
87081690
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YADM_ECOLI
(
P37018
;
P75661
)
|
|
- Protein name
|
Hypothetical protein yadM precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yadM; OrderedLocusNames=b0138;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yadM
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of The N-Terminal Domain Of Nup159
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yadM precursor
|
|
PSI-BLAST
|
Hypothetical fimbrial-like protein ycbV precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
yadM protein - Escherichia coli
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MIKTTPHKIV ILMGILLSPS VFATDINVEF TATVKATTCN ITLTGNNVTN DGNNNYTLRI PKMGLDKIAN
0071 KTTESQADFK LVASGCSSGI SWIDTTLTGN ASSSSPKLII PQSGDSSSTT SNIGMGFKKR TTDDATFLKP
0141 NSAEKIRWST DEMQPDKGLE MTVALRETDA GQGVPGNFRA LATFNFIYQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cttgcgcatt atcaacaaag cccagaagca
-070 gaaaaaatag cacaatctat tattctgaat ggaattcggt gtcagattca gtaactacaa gggacgtcaa
0001 atgataaaaa caacgccaca taaaatagtg atactgatgg gaatattatt atcaccctca gtatttgcaa
0071 cggatattaa tgtagagttt acagccactg tcaaagcgac aacctgtaac atcacactta ctggtaataa
0141 cgtcacgaat gatggcaata ataactacac attgagaatc cctaagatgg gtctggataa gatcgcgaat
0211 aaaacgacag aatctcaggc tgattttaaa ctggttgcca gtgggtgcag cagtggcatc agttggattg
0281 ataccactct gaccggaaat gcatcatcaa gctcacctaa gcttattata ccgcagtctg gtgattcatc
0351 ttcgacgaca agtaatatcg gtatgggttt caaaaaacgg actactgatg atgccacttt ccttaaacct
0421 aacagtgcgg aaaagatacg ctggagcaca gacgagatgc agcccgataa gggtcttgaa atgaccgttg
0491 cgctacgtga aacagatgca gggcaaggcg taccggggaa ttttcgtgca ctggcgacgt ttaatttcat
0561 ctatcaataa gaaggataat tatgatgaca tttaaaaatt tacgttatgg attatccagc agtgtcgttt
0631 tggctgcctc attgttcagc gtactctctt atgcggcaac
|
