|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR32
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yacC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yacC
Search strains by all related name:
yacC b0122 ECK0121 gspS JW0118
|
General information (Go to Linear View: )
|
|
Gene Name
|
yacC
|
|
Alternative name
|
b0122,ECK0121,gspS,JW0118
|
|
Location, Length
|
136,570 - 136,917
(
-
)
;
2.94
min
;
348
(bp) ,
115
(aa)
|
|
Product
|
conserved protein, PulS_OutS family
|
|
Operon Name
|
yacC-speED
|
|
Note
|
|
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Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081688
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YACC_ECOLI
(
P23838
;
P75654
)
|
|
- Protein name
|
Hypothetical protein yacC precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yacC; OrderedLocusNames=b0122, c0151;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yacC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yacC precursor
|
|
PSI-BLAST
|
Hypothetical protein yacC precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein APECO1_1863 [Escherichia coli APEC O1]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 MKTFFRTVLF GSLMAVCANS YALSESEAED MADLTAVFVF LKNDCGYQNL PNGQIRRALV FFAQQNQWDL
0071 SNYDTFDMKA LGEDSYRDLS GIGIPVAKKC KALARDSLSL LAYVK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gggaaggtca agccgcagac acaatttaat
-070 cgacaataat ggtcgtcgcc tcgctcgcag tgtgctaacg tttatcttct ttaagcccct ggtagaagca
0001 atgaagacgt ttttcagaac agtgttattc ggcagcctga tggccgtctg cgcaaacagt tacgcgctca
0071 gcgagtctga agccgaagat atggccgatt taacggcagt ttttgtcttt ctgaagaacg attgtggtta
0141 ccagaactta cctaacgggc aaattcgtcg cgcactggtc tttttcgctc agcaaaacca gtgggacctc
0211 agtaattacg acaccttcga catgaaagcc ctcggtgaag acagctaccg cgatctcagc ggcattggca
0281 ttcccgtcgc taaaaaatgc aaagccctgg cccgcgattc cttaagcctg cttgcctacg tcaaataatc
0351 cctgatacct ttttgtagaa atattgaccg tgcatccgcg gtcaatgtta gctattatgt tgcgcccttt
0421 ttttacgggt gttaacaaag gaggtatc
|
