|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
J Bacteriol. 1993;175(9):2613-24.
The Escherichia coli heat shock gene htpY: mutational analysis, cloning, sequencing, and transcriptional regulation.
Missiakas D, Georgopoulos C, Raina S.
(
8478327
)
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaaW
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaaW
Search strains by all related name:
yaaW b0011 b0012 ECK0011 f237 htgA htpY JW0010
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaaW
|
|
Alternative name
|
b0011,b0012,ECK0011,f237,htgA,htpY,JW0010
|
|
Location, Length
|
10,643 - 11,356
(
-
)
;
0.23
min
;
714
(bp) ,
237
(aa)
|
|
Product
|
conserved protein, UPF0174 family
|
|
Operon Name
|
yaaW
|
|
Note
|
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
|
|
PID
|
1786193
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
HTGA_ECOLI
(
P28697
)
|
|
- Protein name
|
Very hypothetical heat shock protein htgA
|
|
- Synonyms
|
Heat shock protein htpY
|
|
- Gene name
|
Name=htgA; Synonyms=htpY; OrderedLocusNames=b0012;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaaW
(
homologous genes of other bacterias
)
htgA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain , Sindbis Virus Capsid
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0174 protein yaaW
|
|
PSI-BLAST
|
UPF0174 protein yaaW
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b0011 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
|
MMBR References
|
DNA Seq. 1993;3(5):327-32.
Five open reading frames upstream of the dnaK gene of E. coli.
James R, Dean DO, Debbage J.
(
8400364
)
|
J Bacteriol. 1993;175:2613-2624
The Escherichia coli heat shock gene htpY: mutational analysis, cloning, sequencing, and transcriptional regulation.
Missiakas, D., C. Georgopoulos, and S. Raina.
|
J Gen Microbiol. 1991;137(6):1271-7.
Identification of a gene, closely linked to dnaK, which is required for high-temperature growth of Escherichia coli.
Dean DO, James R.
(
1655950
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MNVNYLNDSD LDFLQHCSEE QLANFARLLT HNEKGKTRLS SVLMRNELFK SMEGHPEQHR RNWQLIAGEL
0071 QHFGGDSIAN KLRGHGKLYR AILLDVSKRL KLKADKEMST FEIEQQLLEQ FLRNTWKKMD EEHKQEFLHA
0141 VDARVNELEE LLPLLMKDKL LAKGVSHLLS SQLTRILRTH AAMSVLGHGL LRGAGLGGPV GAALNGVKAV
0211 SGSAYRVTIP AVLQIACLRR MVSATQV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tcaaaaatca ccttttcggg tcatacggtg
-070 aactcatcgg atatggccac gctgaaaatt atcggcgacg actaacgcca gaatatagaa gccacaaaaa
0001 atgaatgtta attacctgaa tgattcagat ctggattttc ttcagcattg tagtgaggaa cagttggcaa
0071 atttcgcccg attgctcacc cataatgaaa aaggcaaaac tcgcctctcc agcgtactga tgcgcaacga
0141 actgtttaaa tcgatggaag ggcatcccga gcaacatcgc cgcaactggc agctgattgc cggagaatta
0211 cagcattttg gtggcgatag tatcgccaac aaactgcgcg gacacggtaa attgtatcgg gccattttgc
0281 tcgatgtttc aaagcgattg aagctgaaag ccgacaaaga gatgtctacg tttgaaattg agcaacagtt
0351 actggaacaa tttctgcgta atacctggaa gaaaatggac gaggaacata agcaggagtt tctgcacgcg
0421 gtcgatgcca gggtgaatga gctggaagag ctgctgccgc tgctgatgaa agacaaatta ttggcaaaag
0491 gtgtgtcgca tttgctttcc agccaactga cccgcatttt acgcacccac gcagcaatga gcgtacttgg
0561 gcatggtttg ctgcgcggcg cggggctggg aggccctgta ggtgcggcac taaatggggt taaagcggtc
0631 agcggcagcg cctatcgcgt gacgattcca gccgtactgc aaatcgcctg cctgcgccgg atggttagcg
0701 ccactcaggt ctgataccgg aaaccgggga aaattttcat tttcccctca aaagatcgta gacactgccc
0771 cactggctga ttattatgcc gcgccctgaa aacactacag ttat
|
