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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
|
OCR28
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yaaU
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
yaaU
Search strains by all related name:
yaaU b0045 ECK0046 JW0044 o443 yabE
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General information (Go to Linear View: )
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Gene Name
|
yaaU
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Alternative name
|
b0045,ECK0046,JW0044,o443,yabE
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Location, Length
|
45,807 - 47,138
(
+
)
;
0.99
min
;
1332
(bp) ,
443
(aa)
|
|
Product
|
putative transporter
|
|
Operon Name
|
yaaU
|
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Note
|
putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
|
putative transport; Not classified
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Gene Ontology
|
GO:0005215
;
transporter activity ( yaaU )
GO:0005351
;
sugar:hydrogen ion symporter activity ( yaaU )
GO:0005886
;
plasma membrane ( yaaU )
GO:0006810
;
transport ( yaaU )
GO:0008643
;
carbohydrate transport ( yaaU )
GO:0016020
;
membrane ( yaaU )
GO:0016021
;
integral to membrane ( yaaU )
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|
PID
|
1786229
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
|
YAAU_ECOLI
(
P31679
;
P31578; P75628
)
|
|
- Protein name
|
Hypothetical metabolite transport protein yaaU.
|
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- Synonyms
|
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- Gene name
|
Name=yaaU; OrderedLocusNames=b0045;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
yaaU
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of The Glycerol-3-Phosphate Transporter From E.Coli
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
|
Hypothetical metabolite transport protein yaaU
|
|
PSI-BLAST
|
High-affinity glucose transporter SNF3
|
|
nr
(database updated :
2007.02.20
)
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BLAST
|
predicted transporter [Escherichia coli K12]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
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PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MQPSRNFDDL KFSSIHRRIL LWGSGGPFLD GYVLVMIGVA LEQLTPALKL DADWIGLLGA GTLAGLFVGT
0071 SLFGYISDKV GRRKMFLIDI IAIGVISVAT MFVSSPVELL VMRVLIGIVI GADYPIATSM ITEFSSTRQR
0141 AFSISFIAAM WYVGATCADL VGYWLYDVEG GWRWMLGSAA IPCLLILIGR FELPESPRWL LRKGRVKECE
0211 EMMIKLFGEP VAFDEEQPQQ TRFRDLFNRR HFPFVLFVAA IWTCQVIPMF AIYTFGPQIV GLLGLGVGKN
0281 AALGNVVISL FFMLGCIPPM LWLNTAGRRP LLIGSFAMMT LALAVLGLIP DMGIWLVVMA FAVYAFFSGG
0351 PGNLQWLYPN ELFPTDIRAS AVGVIMSLSR IGTIVSTWAL PIFINNYGIS NTMLMGAGIS LFGLLISVAF
0421 APETRGMSLA QTSNMTIRGQ RMG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AATACCCGCG CGGCACCTTT GGTGTGGAGT
-070 TCCGTTACGG CTGATGTTGG TTTGATACGT AACGCCGCAC TGACTCTCAT TGCAAAAAAC AGGAATAACC
0001 atgcaaccgt ccagaaactt tgacgatctc aaattctcct ctattcaccg ccgcattttg ctgtggggaa
0071 gcggtggtcc gtttctggat ggttatgtac tggtaatgat tggcgtggcg ctggagcaac tgacgccggc
0141 gctgaaactg gacgctgact ggattggctt gctgggcgcg ggaacgctcg ccgggctgtt cgttggcaca
0211 tcgctgtttg gttatatttc cgataaagtc ggacggcgca aaatgttcct cattgatatc atcgccatcg
0281 gcgtgatatc ggtggcgacg atgtttgttt catcccccgt cgaactgttg gtgatgcggg tacttatcgg
0351 cattgtcatc ggtgcagatt atcccatcgc cacctcaatg atcaccgagt tctccagtac ccgtcagcgg
0421 gcgttttcca tcagctttat tgccgcgatg tggtatgtcg gcgcgacctg tgccgatctg gtcggctact
0491 ggctttatga tgtggaaggc ggctggcgct ggatgctggg tagcgcggcg atcccctgtt tgttgatttt
0561 gattggtcga ttcgaactgc ctgaatctcc ccgctggtta ttacgcaaag ggcgagtaaa agagtgcgaa
0631 gagatgatga tcaaactgtt tggcgaaccg gtggctttcg atgaagagca gccgcagcaa acccgttttc
0701 gcgatctgtt taatcgccgc cattttcctt ttgttctgtt tgttgccgcc atctggacct gccaggtgat
0771 cccaatgttc gccatttaca cctttggccc gcaaatcgtt ggtttgttgg gattgggggt tggcaaaaac
0841 gcggcactag ggaatgtggt gattagcctg ttctttatgc tcggctgtat tccgccgatg ctgtggttaa
0911 acactgccgg acggcgtcca ttgttgattg gcagctttgc catgatgacg ctggcgctgg cggttttggg
0981 gctaatcccg gatatgggga tctggctggt agtgatggcc tttgcggtgt atgccttttt ctctggcggg
1051 ccgggtaatt tgcagtggct ctatcctaat gaactcttcc cgacagatat ccgcgcctct gccgtgggcg
1121 tgattatgtc cttaagtcgt attggcacca ttgtttcgac ctgggcacta ccgatcttta tcaataatta
1191 cggtatcagt aacacgatgc taatgggggc gggtatctcg ctgtttggct tgttgatttc cgtagcgttt
1261 gccccggaga ctcgagggat gtcactggcg cagaccagca atatgacgat ccgcgggcag agaatggggt
1331 aaATTGTTCA GATTTCTCTC TTTTCTGAAT CAATATTATT GACTATAAGC CGCGTGAATA TATGACTACA
1401 CTTTGTGGGA AAACAAAGGC GTAATCACGC GG
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