|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR27
(D)
,
OCR27-1
(D)
,
OCR27-6
(D)
,
OCR27-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yaaI
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaaI
Search strains by all related name:
yaaI b0013 ECK0013 JW0012
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaaI
|
|
Alternative name
|
b0013,ECK0013,JW0012
|
|
Location, Length
|
11,382 - 11,786
(
-
)
;
0.25
min
;
405
(bp) ,
134
(aa)
|
|
Product
|
conserved protein, UPF0412 family
|
|
Operon Name
|
yaaI
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1786195
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YAAI_ECOLI
(
P28696
)
|
|
- Protein name
|
Hypothetical protein yaaI precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaaI; OrderedLocusNames=b0013;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yaaI
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yaaI precursor
|
|
PSI-BLAST
|
Hypothetical protein yaaI precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b0013 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
|
| Sequences |
Amino acid
FASTA format
|
0001 MKSVFTISAS LAISLMLCCT AQANDHKLLG AIAMPRNETN DLALKLPVCR IVKRIQLSAD HGDLQLSGAS
0071 VYFKAARSAS QSLNIPSEIK EGQTTDWINI NSDNDNKRCV SKITFSGHTV NSSDMATLKI IGDD
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttgtaataaa aagaaaagat tacgtgcctg
-070 aatcttctct ttatcagcag taaactagtg ggtattcatc cccctacctc ttcccactaa gagaatcctt
0001 atgaaatccg tttttacgat ttccgccagc ctggcgatta gcctgatgct gtgctgcacg gcgcaggcaa
0071 acgaccataa actcctcggc gccattgcaa tgccgcgtaa cgaaaccaac gatctggcgc tgaaacttcc
0141 tgtttgtcgc attgtgaaac gcatacaact ctctgccgac catggcgatt tacagttaag cggtgcatcg
0211 gtttatttca aagccgcccg tagcgccagt cagagcctga atattccttc agaaataaaa gaagggcaaa
0281 ccactgactg gatcaacatt aacagcgata acgacaataa acgctgcgtc tcaaaaatca ccttttcggg
0351 tcatacggtg aactcatcgg atatggccac gctgaaaatt atcggcgacg actaacgcca gaatatagaa
0421 gccacaaaaa atgaatgtta attacctgaa tgattcagat ctggattttc ttcagcattg tagtgaggaa
0491 cagttggcaa atttc
|
