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PEC Original Annotations
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|
Essentiality
|
|
Class
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non-essential
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|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
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Deletion
|
OCR33-15
(D)
,
OCR33-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sfsA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sfsA
Search strains by all related name:
sfsA b0146 ECK0145 JW0142 sfs sfs1
|
General information (Go to Linear View: )
|
|
Gene Name
|
sfsA
|
|
Alternative name
|
b0146,ECK0145,JW0142,sfs,sfs1
|
|
Location, Length
|
160,782 - 161,486
(
-
)
;
3.47
min
;
705
(bp) ,
234
(aa)
|
|
Product
|
putative DNA-binding transcriptional regulator
|
|
Operon Name
|
sfsA-dksA-yadB
|
|
Note
|
probable regulator for maltose metabolism; GO_process: GO:0016052 - carbohydrate catabolic process
|
|
Function
|
putative regulator; Degradation of small molecules: Carbon compounds
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( sfsA )
|
|
PID
|
1786340
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
SFSA_ECOLI
(
P18273
)
|
|
- Protein name
|
Sugar fermentation stimulation protein A.
|
|
- Synonyms
|
|
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- Gene name
|
Name=sfsA; Synonyms=sfs1; OrderedLocusNames=b0146, z0157, ECs0150;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
sfsA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Sugar fermentation stimulation protein A
|
|
PSI-BLAST
|
Sugar fermentation stimulation protein homolog
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
sugar fermentation stimulation protein [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
PROKAR_LIPOPROTEIN
|
|
MMBR References
|
J Bacteriol. 1991;173(8):2644-8.
Nucleotide sequence and characterization of the sfs1 gene: sfs1 is involved in CRP*-dependent mal gene expression in Escherichia coli.
Kawamukai M, Utsumi R, Takeda K, Higashi A, Matsuda H, Choi YL, Komano T.
(
2013578
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MEFSPPLQRA TLIQRYKRFL ADVITPDGRE LTLHCPNTGA MTGCATPGDT VWYSTSDNTK RKYPHTWELT
0071 QSQSGAFICV NTLWANRLTK EAILNESISE LSGYSSLKSE VKYGAERSRI DFMLQADSRP DCYIEVKSVT
0141 LAENEQGYFP DAVTERGQKH LRELMSVAAE GQRAVIFFAV LHSAITRFSP ARHIDEKYAQ LLSEAQQRGV
0211 EILAYKAEIS AEGMALKKSL PVTL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgacggagtt caccctttac gcctcctcgt
-070 ttgcccgtgg acgcacacgc tacacgccgc taaaacgctg ggcgctaacg caataacaag gattgtcgca
0001 atggaatttt ctccccctct acagcgcgcg acgctaattc agcgttacaa acgtttttta gccgatgtga
0071 tcacacccga tggtcgcgaa ttaacgctac actgcccgaa tacgggtgcg atgaccggtt gtgcaacgcc
0141 tggcgatacc gtctggtatt cgacttcaga caacaccaaa cggaaatacc cacacacctg ggaattaact
0211 caaagccaga gcggcgcatt tatttgcgtc aacacgcttt gggctaacag gttgacgaaa gaggctatcc
0281 ttaatgaatc aatttcagaa ctgtcaggct atagctcgct gaaaagcgaa gtaaaatacg gcgcagaacg
0351 cagccgtatt gactttatgt tgcaggcgga ttcgcgtcca gactgctata ttgaagtgaa atcggttacg
0421 ttagcggaga acgaacaggg atattttccc gatgcggtca ctgaacgagg tcagaaacac cttcgggagt
0491 tgatgagcgt agcggctgaa ggccagcgtg cggttatctt tttcgccgtg ctgcattcag ccattacacg
0561 gttttcaccc gcgcgccaca tcgatgagaa atacgcgcaa ctattgtcag aagctcaaca gaggggggta
0631 gaaattctgg cttacaaagc ggaaatttct gctgaaggca tggctcttaa aaaatcactg ccggttacat
0701 tgtagtaaag taagtaactg gttaatttac attctggtcg cgtgcgcaaa tacgcttttc ctcacacagt
0771 tgtcaagtgt tacgtttaga taattgctat ccgga
|
