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Strain - Detail -

Strain Distribution
Strain No. NIES-905
Institution name National Institute for Environmental Studies
Phylum Cyanophyta Class Cyanophyceae
Order Family
Scientific name  Planktothrix agardhii (Gomont) Anagnostidis & Komárek
Synonym Oscillatoria agardhii Gomont 1892; Oscillatoria agardhii f. gomontii Elenkin 1949; Oscillatoria agardhii f. aequicrassa Elenkin 1949; Oscillatoria agardhii f. moebiusii Elenkin 1949; Oscillatoria agardhii f. lemmermannii Elenkin 1949; Oscillatoria agardhii f. wislouchii Elenkin 1949
Common name Blue-green alga; Cyanobacteria
Locality（Date of collection） U.K.  Cumbria, England,  Windermere, (1975-**-**)
Collector name  
Habitat(Isolation source) Freshwater
Details of habitats   
Isolator(Date of isolation) Jaworski, G. H. M.
Identified by Suda, Shoichiro (Reidentify)
State of strain Unialgal; Clonal; Axenic[2014 Mar]
Preservation state Cryopreservation
Freeze Preservation Yes
Culture condition(Preculture condition) Medium:CT
Medium form:Liquid
Temperature:20 ℃
Light intensity:20-30 μmol phtons/m2/sec  L/D cycle:10L:14D
Duration:1 M
Gene information 16S rRNA (GQ994999 ) 16S rRNA (LC455659 ) 16S rRNA (AB045896 ) 16S-23S rRNA (GQ995017 ) 23S rRNA (LC455660 ) gyrB (GQ995042 ) mcyE (AB638213 ) rpoB (GQ995008 ) rpoC1 (GQ995067 ) Whole-genome (BJCD00000000 )
Characteristics
Cyanobacterial water bloom (aoko); Toxicity  Planktonic  Genome decoded strain (Suzuki et al. 2019)
Cell size(min-max)   Organization Filamentous  
Remarks Cryopreserved; Axenic; Toxicity  

Reference
Sano, T., Usui, T., Ueda, K., Osada, H., Kaya, K.: 2001: Isolation of new protein phosphatase inhibitors from two cyanobacteria species, Planktothrix spp.: J. Nat. Prod., 64, 1052-1055.
Strains: 905 928

Suda, S., Watanabe, M. M., Otsuka, S., Mahakahant, A., Yongmanitchai, W., Nopartnaraporn, N., Liu, Y., Day, J. G.: 2002: Taxonomic revision of water-bloom-forming species of oscillatorioid cyanobacteria.: Int. J. Syst. Evol. Microbiol., 52, 1577-1595.
Strains: 204 205 207 594 595 596 610 844 845 846 847 905 911 912 913 915 916 917 918

Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.: 2012: Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes.: Harmful Algae, 16, 49-57.
Strains: 30 40 77 102 111 230 512 843 905 928 932 937 991 1645 1669 1698 1729 1950 2116

Gaget, V., Welker, M., Rippka, R., de Marsac, N. T.: 2015: A polyphasic approach leading to the revision of the genus Planktothrix (Cyanobacteria) and its type species, P. agardhii, and proposal for integrating the emended valid botanical taxa, as well as three new species, Planktothrix paucivesiculata sp. nov.ICNP, Planktothrix tepida sp. nov.ICNP, Planktothrix serta sp. nov.ICNP, as genus and species names with nomenclatural standing under th ICNP.: Syst. Appl. Microbiol., 38, 141-158.
Strains: 905 928 1266

Chiu, Y.-T., Yen, H.-K., Lin, T.-F.: 2016: An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications.: Environ. Res., 151, 618-627.
Strains: 81 512 824 905 2104 2116

Suzuki, S., Yamaguchi, H., Kawachi, M.: 2019: Draft genome sequences of three filamentous cyanobacterial strains, Dolichospermum planctonicum NIES-80, Planktothrix agardhii NIES-905, and Sphaerospermopsis reniformis NIES-1949.: Microbiol. Resour. Ann.., 8, e00605-19 (article ID).
Strains: 80 905 1949

Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y.: 2020: Cyanobacterial classification with the toxicity using MALDI Biotyper.: J. Am. Soc. Mass Spectrom., 31, 1572-1578.
Strains: 27 39 42 73 81 87 89 100 101 102 103 104 105 107 111 112 207 208 230 266 298 416 433 478 510 512 515 592 593 604 611 808 809 835 843 846 847 905 928 931 932 945 981 989 1025 1043 1058 1061 1064 1068 1069 1071 1076 1085 1099 1101 1105 1113 1115 1126 1133 1134 1135 1144 1157 1215 1642 1643 1652 1668 1672 1673 1677 1678 1698 2087 2131 2412 2665 3708 3733 3734 3736 3755 3756 3757