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Strain - Detail -

Strain Distribution
Strain No. NIES-2842
Institution name National Institute for Environmental Studies
Phylum Heterokontophyta Class Bacillariophyceae
Order Family
Scientific name  Skeletonema menzelii Guillard, Carpenter & Reimann
Synonym
Common name Centric diatom
Locality（Date of collection） Japan  Fukuoka,  Dokai Bay, (2008-09-10)
Collector name  
Habitat(Isolation source) Marine
Details of habitats Eutrophic; Surface  Harbor
Isolator(Date of isolation) Yamada, Machiko
Identified by Yamada, Machiko
State of strain Unialgal; Clonal; Non-axenic
Preservation state Subculture
Freeze Preservation Uncertain
Culture condition(Preculture condition) Medium:ESM
Medium form:Liquid
Temperature:15 ℃
Light intensity:3-10 μmol phtons/m2/sec  L/D cycle:10L:14D
Duration:21 D
Gene information 28S rRNA (AB572830 ) CO1 (AB948163 )
Characteristics
  Planktonic 
Cell size(min-max)   Organization  
Remarks  

Reference
Yamada, M., Katsuki, E., Otsubo, M., Kawaguchi, M., Ichimi, K., Keriyama, H., Tada, K., Harrison, P. J.: 2010: Species diversity of the genus Skeltonema (Bacillariophyceae) in the Industrial Harbor Dokai Bay, Japan.: J. Oceanogr., 66, 755-771.
Strains: 2837 2838 2839 2841 2842 2843 2844

Kaeriyama, H., Katsuki, E., Otsubo, M., Yamada, K., Ichimi, K., Tada, K., Harrison, P. J.: 2011: Effects of temperature and irradiance on growth of strains belonging to seven Skeletonema species isolated from Dokai Bay, southern Japan.: Eur. J. Phycol., 46, 113-124.
Strains: 2837 2838 2839 2841 2842 2843 2844

Kawachi, M., Kataoka, T., Sato, M., Noël, M.-H., Kuwata, A., Demura, M., Yamaguchi, H.: 2016: Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community.: Gene, 576, 708-716.
Strains: 765 1966 2842

Yamada, M., Otsubo, M., Tsutsumi, Y., Mizota, C., Nakamura, Y., Takahashi, K., Iwataki M.: 2017: Utility of mitochondrial-encoded cytochrome c oxidase I gene for phylogenetic analysis and species identification of the planktonic diatom genus Skeletonema.: Phycol. Res., 65, 217-225.
Strains: 16 223 2837 2838 2842

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M.: 2017: Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection.: Microb. Resour. Syst., 33, 19-29.
Strains: 1 8 9 14 15 17 71 115 223 225 233 234 265 274 275 276 277 278 279 280 281 282 284 293 323 324 330 333 344 345 346 347 348 350 353 372 377 388 391 395 407 408 409 413 414 417 461 462 466 487 534 548 553 556 557 558 559 560 562 587 588 589 590 603 605 622 623 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 741 765 766 767 805 837 997 1001 1002 1003 1004 1005 1006 1007 1009 1011 1016 1017 1044 1045 1046 1047 1302 1303 1324 1327 1330 1339 1340 1349 1353 1370 1375 1376 1379 1383 1384 1385 1386 1387 1391 1392 1393 1395 1398 1399 1400 1401 1699 1700 1730 1813 1815 1816 1826 1827 1831 1862 1863 1864 1865 1874 1963 1964 1965 1974 1975 1976 2142 2143 2144 2145 2147 2148 2300 2331 2332 2351 2363 2364 2365 2369 2370 2376 2506 2533 2534 2535 2536 2537 2590 2633 2668 2689 2690 2691 2693 2694 2696 2697 2707 2716 2717 2718 2720 2722 2723 2725 2726 2729 2730 2731 2732 2770 2771 2772 2773 2839 2840 2841 2842 2843 2844 2859 2872 2878 2890 2899 3391 3689 3690 3691