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Ref. ID Author Title Journal Year Vol. Pages Keyword Strains
870   Nakazawa, A., Yamada, T. & Nozaki, H.       2004        
2208   Watanuki, T., Matsushita, K., Nishina, M., Hori, E., Kato, K.     J. Phys. Fit. Nutr. Immunol.,   1994   40-44 (in Japanese).     NIES-3744  
3600               NIES-1380  
3626               NIES-1642 NIES-1666 NIES-1677
NIES-1696 NIES-1723 NIES-333
NIES-512 NIES-75 NIES-805
 
3634               NIES-144 NIES-2146 NIES-2160
NIES-24 NIES-47  
3840               NIES-395  
2191   Tanabe, Y.   "Biological species recognition" within the toxic cyanobacterium Microcystis.   IFO Res. Commun.,   2010   24, 69-79 (in Japanese with English summary).   Microcystis; MLST; microcystin synthetase; recombination; biological species recognition   NIES-2465 NIES-2466 NIES-2467
NIES-2468 NIES-2469 NIES-2470
NIES-2471 NIES-2472 NIES-2473
NIES-2474 NIES-2475 NIES-2476
NIES-2477 NIES-2478 NIES-2479
NIES-2480 NIES-2481 NIES-2482
NIES-2483 NIES-2484 NIES-2485
NIES-2486 NIES-2487 NIES-2488
NIES-2489 NIES-2490 NIES-2491
NIES-2492 NIES-2493 NIES-2494
NIES-2495 NIES-2496 NIES-2542
NIES-2543 NIES-2544 NIES-2545
NIES-2546 NIES-2547 NIES-2548
NIES-2549 NIES-2550 NIES-2551
NIES-2552 NIES-2553 NIES-2554
NIES-2555 NIES-2556 NIES-2557
NIES-2558 NIES-2559 NIES-2560
NIES-2561 NIES-2591 NIES-2592
NIES-2593 NIES-2594 NIES-2595
NIES-2596 NIES-2597 NIES-2598
NIES-2599 NIES-2600 NIES-2601
NIES-2602 NIES-2603 NIES-2604
NIES-2605 NIES-2606 NIES-2607
NIES-2608 NIES-2609 NIES-2610
NIES-2611 NIES-2612 NIES-2613
NIES-2617 NIES-2618 NIES-2619
NIES-2620 NIES-2621 NIES-2622
NIES-2623 NIES-2624 NIES-2625
NIES-2626 NIES-2627 NIES-2628
NIES-2629  
3726   Hirayama, A., Sueyoshi, M. N., Nakano, T., Ota, Y., Kurita, H., Tasaki, M., Kuroiwa, Y., Kato, T., Serizawa, S., Kojima, K., Al-Maamari, R. S., Hasegawa, T., Thomas-Hall, S. R., Schenk, P. M.   .Development of large-scale microalgae production in the Middle East.   Bioresour. Technol.,   2022   343, 126036 (article ID).   Chlorella sorokiniana; Large-scale microalgae production; Outdoor raceway ponds; Photobioreactor; Water temperature control   NIES-2169  
1355   Otsuka, S., Suda, S., Li, R., Watanabe, M., Oyaizu, H., Matsumoto, S., Watanabe, M. M.   16S rDNA sequences and phylogenetic analyses of Microcystis strains with and without phycoerythrin.   FEMS Mircobiol. Lett.,   1998   164, 119-124.   cyanobacterium; Microcystis; 16S rDNA; taxonomy   NIES-1054 NIES-1055 NIES-1067
NIES-1072 NIES-1085 NIES-1090
NIES-1143  
2890   Neilan, B. A., Cox, P. T., Hawkins, P. R., Goodman, A. E.   16S ribosomal RNA gene sequence and phylogeny of toxic Microcystis sp. (Cyanobacteria).   DNA Seq.,   1994   4, 333-337.   Cyanobacteria; Microcystis; 165 rRNA gene; DNA sequence; taxonomy; phylogeny   NIES-89  
1086   Ichimura, T. & Itoh, T.   17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)].   In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo,   1977   pp. 355-373 (in Japanese).     NIES-122 NIES-123 NIES-127
NIES-131 NIES-144 NIES-152
NIES-173 NIES-175 NIES-179
NIES-180 NIES-181 NIES-182
NIES-183 NIES-185 NIES-19
NIES-198 NIES-200 NIES-203
NIES-206 NIES-21 NIES-217
NIES-22 NIES-226 NIES-227
NIES-23 NIES-24 NIES-241
NIES-266 NIES-267 NIES-268
NIES-27 NIES-28 NIES-295
NIES-30 NIES-309 NIES-31
NIES-310 NIES-32 NIES-33
NIES-334 NIES-338 NIES-34
NIES-36 NIES-37 NIES-379
NIES-38 NIES-39 NIES-40
NIES-41 NIES-436 NIES-44
NIES-448 NIES-45 NIES-450
NIES-455 NIES-46 NIES-47
NIES-48 NIES-49 NIES-50
NIES-527  
2933   Nakada, T., Ito, T., Tomita, M.   18S ribosomal RNA gene phylogeny of a colonial volvocalean lineage (Tetrabanaceae-Goniaceae-Volvocaceae, Volvocales, Chlorophyceae) and its close relatives.   J. Jpn. Bot.,   2016   91, 345-354.   18S rRNA; colonial; green algae; molecular phylogeny; unicellular; Volvocales   NIES-1362 NIES-2242 NIES-2246
NIES-2266 NIES-2567 NIES-3388
NIES-4126 NIES-418 NIES-456
NIES-460 NIES-474 NIES-541
NIES-544 NIES-545 NIES-564
NIES-566 NIES-571 NIES-654
NIES-666 NIES-721 NIES-725
NIES-728 NIES-735 NIES-737
NIES-867 NIES-877 NIES-879
NIES-880 NIES-881 NIES-882
NIES-883  
2010   Becker, B. & Melkonian, M.   2-keto-sugar acids in green flagellates: A chemical marker for prasinophycean scales.   J. Phycol.,   1991   27, 498-504.   cell wall composition; Chlorophyta; 2-keto-sugar acids; Prasinophyceae; scale composition   NIES-2253  
92   Ichimura, T.   2. Isolation and culture methods of algae. 2.5.B. Freshwater algae [2. Sorui no bunri to baiyoho. 2.5.B. Tansui sorui].   In Methods in Phycological Studies [Sorui Kenkyuho], Eds. by Nishizawa, K. & Chihara, M., Kyoritsu Shuppan, Tokyo,   1979   p. 294-305 (in Japanese without English title).      
263   Nakahara, H. & Sako, Y.   2. Life history of freshwater phytoplankton [2. Tansui syokubutsu purankuton no seikatsushi].   In Freshwater red tide [Tansui Akashio], Ed. by Kadota, H., Koseisya-Koseikaku, Tokyo,   1987   p. 21-77 (in Japanese without English title).      
1483   Watanabe, M., Kohata, K., Kunugi, M.   31P nuclear magnetic resonance study of intracellular phosphate pools and polyphosphate metabolism in Heterosigma akashiwo (Hada) Hada (Raphidophyceae).   J. Phycol.,   1987   23, 54-62.   cell extraction; Heterosigma akashiwo; intracellular phosphate; phosphodiester; 31P-NMR; polyphosphate; Raphidophyceae; sugar-phosphate   NIES-6  
1443   Toume, K. & Ishibashi, M.   5α, 8α-epidioxysterol sulfate from a diatom Odontella aurita.   Phytochemistry,   2002   61, 359-360.   Odontella aurita; diatom; 5a, 8a-epidioxysterol; sulfate   NIES-589  
3675   Alvarenga, D. O., Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D., Fiore, M. F.   Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments.   Int. J. Syst. Evol. Microbiol.,   2021   71, 004811 (article ID).   Nostocaceae; phyllosphere; anthropogenic dark earth; nitrogen fixation; phylogenomics   NIES-4103  
3590   Tuji, A., Yamaguchi, H., Kataoka, T., Sato, M., Sano, T., Niiyama, Y.   Annamia dubia sp. nov. with a description of a new family, Geminocystaceae fam. nov. (Cyanobacteria).   Fottea,   2021   21, 100-109.     NIES-4383  
3895   Seto, K., Nakada, T., Tanabe, Y., Yoshida, M., Kagami, M.   Aphelidium parallelum, sp. nov., a new aphelid parasitic on selenastracean green algae.   Mycologia,   2022   114, 544-555.   Aphelida; Aphelidiomycota; molecular phylogeny; parasitoid; ultrastructure; 1 new taxon   NIES-2193 NIES-2195 NIES-35
NIES-385 NIES-4214  
3037   Hoshina, R., Kobayashi, M., Suzaki, T., Kusuoka, Y.   Brandtia ciliaticola gen. et sp. nov. (Chlorellaceae, Trebouxiophyceae) a common symbiotic green coccoid of various ciliate species.   Phycol. Res.,   2018   66, 76-81.   Chlorella; genus definition; rRNA structure   NIES-4032 NIES-4033 NIES-4034
 
3038   Hoshina, R. & Nakada, T.   Carolibrandtia nom. nov. as a replacement name for Brandtia Hoshina (Chlorellaceae, Trebouxiophyceae).   Phycol. Res.,   2018   66, 82-83.   Chlorella-like alga; ciliate; later homonym; nomenclature; photobiont; symbiosis   NIES-4032 NIES-4033 NIES-4034
 
1057   Hara, Y.   Chattonella ovata Y. Hara et Chihara mss.   In Red Tide Organisms in Japan - An Illustrated Taxonomic Guide, Eds. by Fukuyo, Y., Takano, H., Chihara, M. & Matsuoka, K., Uchida Rokakuho, Tokyo,   1990   pp. 340-341 (in Japanese with English summary).     NIES-603  
2171   Nakada, T. & Tomita, M.   Chlamydomonas neoplanoconvexa nom. nov. and its unique phylogenetic position within Volvocales (Chlorophyceae).   Phycol. Res.,   2011   59, 194-199.   Caudivolvoxa; Chlamydomonas neoplanoconvexa nom. nov.; molecular phylogeny; morphology; pyrenoid; Volvocales   NIES-2570  
1085   Ichimura, T.   Chlamydomonas pulsatilla Wollenweber from a supra-littoral rockpool on a small island offshore the city of Muroran, Hokkaido, Japan.   Algol. Stud.,   1997   85, 23-29.   Chlamydomonas pulsatilla; euryhaline species; acetate; nutrition; supra-littoral rockpool   NIES-122  
3188   Pröschold, T., Darienko, T., Krienitz, L., Coleman, A. W.   Chlamydomonas schloesseri sp. nov. (Chlamydophyceae, Chlorophyta) revealed by morphology, autolysin cross experiments, and multiple gene analyses.   Phytotaxa,   2018   362, 21-38.   integrative taxonomy; Chlamydomonas; intraspecific variation; species concept; DNA barcoding   NIES-2462  
2793   Kim, B.-H., Ramanan, R., Kang, Z., Cho, D.-H., Oh, H.-M., Kim, H.-S.   Chlorella sorokiniana HS1, a novel freshwater green algal strain, grows and hyperaccumulates lipid droplets in seawater salinity.   Biomass Bioenerg.,   2016   85, 300-305.   Chlorella; Salt stress; Green algae; Lipid droplets; Biodiesel; Commercialization   NIES-2150  
3148   Hoshina, R., Iwataki, M., Imamura, N.   Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): Redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year.   Phycol. Res.,   2010   58, 188-201.   Chlorella variabilis; ITS2; Micractinium reisseri; Paramecium bursaria; species concept   NIES-2540 NIES-2542  
3849   Ramírez-Romero, A., Da Costa Magalhães, B., Dimitriades-Lemaire, A., Sassi, J.-F., Delrue, F., Steyer, J.-P.   Chlorellaceae feedstock selection under balanced nutrient limitation.   FERMENTATION,   2022   8, 554 (article ID).   biofuel; microalgal biomass; Chlorella; lipids   NIES-2173 NIES-227  
2137   Nakada, T., Soga, T., Tomita, M., Nozaki, H.   Chlorogonium complexum sp. nov. (Volvocales, Chlorophyceae), and morphological evolution of Chlorogonium.   Eur. J. Phycol.,   2010   45, 97-106.   Chlorogonium complexum sp. nov.; Chlorophyceae; molecular phylogeny; morphology; pyrenoids; taxonomy   NIES-2296 NIES-2297 NIES-692
NIES-751 NIES-752 NIES-753
 
3734   Pröschold, T. & Darienko, T.   Choricystis and Lewiniosphaera gen. nov. (Trebouxiophyceae Chlorophyta), two different green algal endosymbionts in freshwater sponges.   Symbiosis,   2020   82, 175-188.   Choricystis; Lewiniosphaera; Freshwater sponges; Endosymbiosis   NIES-2167 NIES-2171 NIES-2342
NIES-4033 NIES-4292  
3398   Petersen, J., Ludewig, A. K., Michael, V., Bunk, B., Jarek, M., Baurain, D., Brinkmann, H.   Chromera velia, endosymbioses and the rhodoplex hypothesis--plastid evolution in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages).   Genome Biol. Evol.,   2014   6, 666-684.   next-generation sequencing; eukaryote-to-eukaryote endosymbioses; horizontal and endosymbiotic gene transfer; chromalveolate hypothesis; long-branch attraction artifacts   NIES-4391  
3346   Yuasa, T., Kawachi, M., Horiguchi, T., Takahashi, O.   Chrysochromulina andersonii sp. nov. (Prymnesiophyceae), a new flagellate haptophyte symbiotic with radiolarians.   Phycologia,   2019   58, 211-224.     NIES-4257  
3262   Hovde, B. T., Deodato, C. R., Andersen, R. A., Starkenburg, S. R., Barlow, S.B., Cattolico, R.A.   Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade.   Algal Res.,   2019   37, 307-319.   Haptophyta; Chrysochromulina genome; nad evolution; FtsZ phylogeny; Meiosis; Taxon diagnosis   NIES-562  
3867   McGregor, G. B., Sendall, B. C., Niiyama, Y., Tuji, A., Willis, A.   Chrysosporum ovalisporum is synonymous with the true-branching cyanobacterium Umezakia natans (Nostocales/Aphanizomenonaceae).   J. Phycol.,   2023   59, 326-341.     NIES-21 NIES-26 NIES-2665
NIES-3585 NIES-4103 NIES-4490
 
2178   Denboh, T., Ichimura, T., Hendrayanti, D., Coleman, A. W.   Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 Group I intron and ITS2 of nuclear rDNA.   J. Phycol.,   2003   39, 960-977.   biological species; Closterium; group I introns; ITS2; mating group; molecular phylogeny; speciation   NIES-172 NIES-173 NIES-174
NIES-182 NIES-183 NIES-228
NIES-229  
3374   Kawasaki, S., Yoshida, R., Ohkoshi, K., Toyoshima, H.,   Coelastrella astaxanthina sp. nov. (Sphaeropleales, Chlorophyceae), a novel microalga isolated from an asphalt surface in midsummer in Japan.   Phycol. Res.,   2020   68, 107-114.   astaxanthin; dry conditions; photo-oxidative stress; Scenedesmaceae; terrestrial microalgae   NIES-2151  
3255   Seto, K. & Degawa, Y.   Collimyces mutans gen. et sp. nov. (Rhizophydiales, Collimycetaceae fam. nov.), a new chytrid parasite of Microglena (Volvocales, clade Monadinia).   Protist,   2018   169, 507-520.   Chytrid; Collimyces mutans; Microglena; parasite; Rhizophydiales; zoospore ultrastructure   NIES-2220 NIES-2235 NIES-2743
NIES-2744 NIES-755 NIES-858
 
3484   Yokoyama, A., Scott, J. L., Zuccarello, G. C., Kajikawa, M., Hara, Y., West, J. A.   Corynoplastis japonica gen. et sp. nov. and Dixoniellales ord. nov. (Rhodellophyceae, Rhodophyta) based on morphological and molecular evidence.   Phycol. Res.,   2009   57, 278-289.   chloroplast; Corynoplastis gen. et sp. nov.; Dixoniellales nov. ord.; Golgi; mannitol; Porphyridiales; pyrenoids; Rhodella; Rhodellales; Rhodellophyceae   NIES-2662  
2590   Misumi, O., Matsuzaki, M., Nozaki, H., Miyagishima, S., Mori, T., Nishida, K., Yagisawa, F., Yoshida, Y., Kuroiwa, H., Kuroiwa, T.   Cyanidioschyzon merolae genome A tool for facilitating comparable studies on organelle biogenesis in photosynthetic eukaryotes.   Plant Physiol.,   2005   137, 567-585.     NIES-3377  
1267   Nakano, T. & Isagi, Y.   Dictyochloropsis irregularis sp. nov. (Chlorococcales, Chloro-phyceae) isolated from the surface of bark   Phycologia,   1987   26, 222-227.     NIES-378  
2543   Takahashi, Y., Yoshida, M., Inouye, I., Watanabe, M. M.   Diplophrys mutabilis sp. nov., a new member of Labyrinthulomycetes from freshwater habitats.   Protist,   2014   165, 50-65.   Amphitremida; Diplophrys mutabilis; lipid body; phylogeny; ultrastructure   NIES-3361  
3358   Štenclová, L. & Fučíková, K.   Dispora speciosa, a new addition to the genus Parallela and the first coccoid member of the family Microsporaceae.   Phytotaxa,   2019   419, 10.1016/j.scitotenv.2019.134596   18S rRNA; atpB; epitype; phylogeny; psaB; TEM; rbcL   NIES-394  
3739   Temraleeva, A., Krivina, E., Boldina, O.   Edaphochloris, gen. nov.: a new genus of soil green algae (Trebouxiophyceae, Chlorophyta) with simple morphology.   Plant Syst. Evol.,   2022   308, 4 (article ID).     NIES-4016  
3632   Senavirathna, M. D. H. J., Muhetaer, G., Atapaththu, K. S. S., Fujino, T.   Egeria densa allelopathy on Microcystis aeruginosa under different light intensities and preliminary insight into inter-parameter relationships.   Water Air Soil Pollut.,   2021   232, 135 (article ID).   Biological control; Cyanobacteria; Coexistence; Environmental management; Macrophytes; Species interactions   NIES-111  
3976   Wijesinghe, A., Senevirathna, M. D. H. J., Fujino, T.   Egeria densa organic extracts: an eco-friendly approach to suppress Microcystis aeruginosa growth through allelopathy.   Water Sci. Technol.,   2023   88, 2955–2973.   allelopathy; cyanobacteria; growth inhibition; macrophytes; plant extracts   NIES-111  
2201   Shiratori, T., Yabuki, A., Ishida, K-I.   Esquamula lacrimiformis n.g., n. sp., a new member of Thaumatomonads that lacks siliceous scales.   J. Eucaryot. Microbiol.,   2012   59, 527-536.   Cercozoa; extrusome; microbody; phylogeny; taxonomy; ultrastructure   NIES-2745  
3139   Wang, Y., Seppänen-Laakso, T., Rischer, H., Wiebe, M. G.   Euglena gracilis growth and cell composition under different temperature, light and trophic conditions.   PLoS One,   2018   13, e0195329 (article ID).     NIES-48  
3450   Alcorta, J., Vergara-Barros, P., Antonaru, L. A., Alcamán-Arias, M. E., Nürnberg, D. J., Díez, B.   Fischerella thermalis: a model organism to study thermophilic diazotrophy, photosynthesis and multicellularity in cyanobacteria.   Extremophiles,   2019   23, 635–647.   Fischerella: Mastigocladus: Distribution: Thermophile: Nitrogen fxation: Photosynthesis: Multicellularity: Hot springs   NIES-3754 NIES-4106 NIES-592
 
2482   Eikrem, W., Romari, K., Latasa, M., Le Gall, F., Throndsen, J., Vaulot, D.   Florenciella parvula gen. et sp. nov. (Dictyochophyceae, Heterokontophyta), a small flagellate isolated from the English Channel.   Phycologia,   2004   43, 658-668.     NIES-2684